Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0178 ATGGGATTTCGCTTACCTGGTATTAGAAGGACTTCATTCCAAGCAGCTTCAAAGGCTGTGGAAGTCCCAAAAGGGTGCATTGCTGTCTACGTTGGAGAGAAAATGAAGCGTTTTATTATTTCAATTTCGTACTTGAGTCAACCTTCATTTCAAGAATTACTAAGCCAAGTTGAAGAAGAATTTGGATATGATCATCGAATGGGCGGTCTCACAATTCCTTGCAATGAGGATGCTTTCTTAGACCTTGTTTCTCAGTTAAATGGGCTATAA 270 0.3963 MGFRLPGIRRTSFQAASKAVEVPKGCIAVYVGEKMKRFIISISYLSQPSFQELLSQVEEEFGYDHRMGGLTIPCNEDAFLDLVSQLNGL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0178 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 5 86 IPR003676 GO:0009733
Lal1g0178 89 PANTHER SMALL AUXIN-UP RNA-RELATED 5 86 - -
Lal1g0178 89 Pfam Auxin responsive protein 12 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0178 Lal-Chr1 1103938 1104207 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0178 9 79 Calmodulin-binding Proteins AT3G43120 46.479 2.34e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0178 K14488 - gmx:100806671 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0178 1 1103938 1104207 Lal1g0178 1 1103938 1104207 ECH