Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0177 ATGGGTTTCCGTTTGCCTGGTCTTCAAAGGCGCACACATGTTCCAAAGGGTTACCTTGCAGTTTATGTAGGAGAAAACCAAAAGAAACGGTTTGTGATTCCTATATCATACTTGAATGAACCAGTAATTCAAGACCTGCTGAGTCAAGCAGAACAAGAATTTGGATTTGATCATCCAATGGGTGGCCTTACAATTCCTTGTCAAGAAGATGTCTTTCTTGATATCACTTCTCGCTTGCATAAGCCATAA 249 0.4056 MGFRLPGLQRRTHVPKGYLAVYVGENQKKRFVIPISYLNEPVIQDLLSQAEQEFGFDHPMGGLTIPCQEDVFLDITSRLHKP 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0177 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 79 IPR003676 GO:0009733
Lal1g0177 82 PANTHER - 13 79 - -
Lal1g0177 82 Pfam Auxin responsive protein 11 78 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0177 Lal-Chr1 1101774 1102022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0177 14 72 Calmodulin-binding Proteins AT3G43120 54.237 4.43e-16 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0177 K14488 - gmx:112997797 147.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0177 1 1101774 1102022 Lal1g0177 1 1101774 1102022 ECH
Lal1g0177 1 1101774 1102022 Lal2g0105 2 656171 656470 LSH