Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0168 ATGACACTTGAGAGGAGATTTGTTTTGGTTGGGATTAGAATTGATAGTTACAGCAGACATATTCTCAACTGGGCTATTTTCAAAGTTGCTGAACCTGGTGACTATGTTATTGCTGTCAATGTAGTTAAAAATCCTGATTATGTTCCCAAAAACAAGAGTCTGATAGCTGAATATTTAGAGGTTTATGAAGGCCTATGTGATGTTAAGAAGGTAGGTCTCATTGGTCAAGTCTTCACAGGAAGCTCTTTTAGAAGCATTCTTGTTAGAGAAGCAAAGAATCATGCTGCTATGGCTCTAGTGGTAGGGGGTAGAACTTCCACAGCCAAATATTGCTCCAAAAGACTGCCACCAAACACTAATGTTCTGGCCATCCAAGATTCAAGGATTGTCTTCAGGAGGTGCACCAATAACCAATTACCAGGTGGTCTTTTGCTGGATCCAAGACCAAGTTTAAGAAGCATAGGAAACCTCAGCGACAGAGTAAAGCAGTCCGAATCAGATGATTGTGAGGTGGAGAGTGAGAAACCAAGAAGCCAAAATAGAATTGAATTGAAGGAGGAAGCATCTAACAGATTAGAGAGGCGAAAGCTAAGGTCATCATCTATGTTTTCTGGTGATCCTTCTGAGCAGAAGCTTGGTTGGCCTCTGCTCCGAAGAGCGAAATCAGAAATATCTTCAACCCATCATCATGTAAGGGACATGTCAGTAGTGCAATGGGTTATGAGCTTACCAGATCGTTCACCAAAGAAAAGTCCTCACTCTTGTTCTTCCATTGAGGAAAATCCATCACAAAGAGGCATCAGTGACAAGGATGATGAGAGTTCTAAAAATTATTCAGCTACATATTTTATTGAAGTACCAAAAGGACTAGAGGGAAAGTTAAGTGTAAATTCACTCCATTGCAAGTGGTTCAGCCTTGAGCTTCTTAAGTCCTGCACTGCCCACTTCTCTTCAGAAAACTTGATTGGGAAAGGAGGTAGCAATCGTGTGTACAAAGGAGTTCTCCCTGATGGGAAACTAATAGCAGTCAAAGTTTTGAAGTCAACAAAAGAAGCCTTGAAAGATTTTGCCCTTGAGGTGGAAATAATATCCTCATTGAAGCACAAAAACATCACTTCTCTACTTGGTATTTGCATTGAGGACAATGCCTTGATATCTGTTTATGATTATTTCCCCAAAGGCAGCTTAGAGGAAAATCTACATGGTAAAGTTGCAGTGTGA 1221 0.4054 MTLERRFVLVGIRIDSYSRHILNWAIFKVAEPGDYVIAVNVVKNPDYVPKNKSLIAEYLEVYEGLCDVKKVGLIGQVFTGSSFRSILVREAKNHAAMALVVGGRTSTAKYCSKRLPPNTNVLAIQDSRIVFRRCTNNQLPGGLLLDPRPSLRSIGNLSDRVKQSESDDCEVESEKPRSQNRIELKEEASNRLERRKLRSSSMFSGDPSEQKLGWPLLRRAKSEISSTHHHVRDMSVVQWVMSLPDRSPKKSPHSCSSIEENPSQRGISDKDDESSKNYSATYFIEVPKGLEGKLSVNSLHCKWFSLELLKSCTAHFSSENLIGKGGSNRVYKGVLPDGKLIAVKVLKSTKEALKDFALEVEIISSLKHKNITSLLGICIEDNALISVYDYFPKGSLEENLHGKVAV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0168 406 PANTHER OS01G0253100 PROTEIN 6 403 IPR045271 GO:0004714|GO:0006468
Lal1g0168 406 MobiDBLite consensus disorder prediction 161 200 - -
Lal1g0168 406 MobiDBLite consensus disorder prediction 244 274 - -
Lal1g0168 406 Gene3D Phosphorylase Kinase; domain 1 285 390 - -
Lal1g0168 406 MobiDBLite consensus disorder prediction 158 208 - -
Lal1g0168 406 ProSiteProfiles Protein kinase domain profile. 316 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0168 406 CDD USP_Like 8 116 - -
Lal1g0168 406 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 6 403 - -
Lal1g0168 406 SUPERFAMILY Protein kinase-like (PK-like) 297 402 IPR011009 -
Lal1g0168 406 Pfam Protein tyrosine and serine/threonine kinase 319 402 IPR001245 GO:0004672|GO:0006468
Lal1g0168 406 MobiDBLite consensus disorder prediction 249 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0168 Lal-Chr1 1063443 1066113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0168 304 403 Trihelix Transcription Factor Family AT1G70460 46.535 2.33e-21 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal1g0168 PK_Tyr_Ser-Thr 3.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0168 - - lang:109355495 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0168 1 1063443 1066113 Lal1g0168 1 1063443 1066113 ECH
Lal1g0168 1 1063443 1066113 Lal21g0671 21 5215775 5219619 ECH
Lal1g0168 1 1063443 1066113 Lal17g0753 17 5396473 5399992 ECH
Lal1g0168 1 1063443 1066113 Lal9g0123 9 812890 819414 LSH