Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0161 ATGGAATTTTTGGGTGACCTGTTACCTGCCAATGACCCGTGCGAAGTCGGTTTGGGGGAATGTGACTTCTTCTCTGAAGTCGGTTTGGTGGAGTGTGGCTTCTTCTATGAAGCCGGGTTGGAGAAATACGACTTCTTGTATGAAGTCGGTTTTGGGAGTGATGACAACACATTGAAGTCGACTATAGATGAAATTGATGTTAGTGAAGATGGAAATATTAAGGAAGGAGAGGAGTTTGATTTTGAAGAAATTGATTTTGGATCATTAAACGAAGATGAAGTAAAGAAATATAGGTTTGTAAACAATGATATTGCATATAATTTTTATAAGATGTATGGTTTGAAGAAAGAATTTGGCATTAGAAAATATCATATCCGTCGGGACAAGGATGGTGAAATTTTATGGCAATCATTTTTTTGTGATAGAGAGGGATTTAGAGATAAGAAAAATGAATTAGTTCGAAAAATGATACAAGAAAAGAAACGAGATGTGGTTGTTTAG 501 0.3573 MEFLGDLLPANDPCEVGLGECDFFSEVGLVECGFFYEAGLEKYDFLYEVGFGSDDNTLKSTIDEIDVSEDGNIKEGEEFDFEEIDFGSLNEDEVKKYRFVNNDIAYNFYKMYGLKKEFGIRKYHIRRDKDGEILWQSFFCDREGFRDKKNELVRKMIQEKKRDVVV 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0161 166 Pfam FAR1 DNA-binding domain 107 158 IPR004330 -
Lal1g0161 166 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 56 152 - -
Lal1g0161 166 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 56 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0161 Lal-Chr1 1033097 1033878 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal1g0161 FAR1 1.2e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0161 - - lang:109327968 137.117