Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0158 ATGCTGTTGGTATGTGTGCCACATCTGTGTGATATCTTTTATAGAATGGGCCTGTCTAACAAGGACATTGTTGCAATGCCTGGGGGACATTTGCTGGGAATATCACATCCAGAGAGATCAGGGTTTGATGGCCCTTGGACAGAGGATCCCCTGAAGTTTGACAACTCATACTTTGTGGAACTTTCAAAAGAAGATTCTGCGGGGCTGCTTAAACTTCCAACAGGCAAGGCTTTATTGGATGCTCCTGAGTTTTGCAATCCCATATCATTGTATGCAATGTCTCTGTGCCCTCAAAGGCAGCTTCTCCTAAGTCCTAAGGACTCAACTGTACTGGTGCATGGTGCTGTCGGAGTTGTAGTTACTGCTGTGGTGGTGTTACCTGTACTAAGTTCGCAAAAGAGGGAAGTAGACTCGGCTTTGTTAATCTCACTCAAATATGACATATGTGTGACCTATAATGAGAAATATTGGGATCAGTTTCGCAGTTTCAATATCTGTTTTCTTTGTACCAATAGGAGTAATGCTACAAAGATAGATTTTGCTGGACTAGGATCAGATAAAGTGCTTGATATGGCAATTACTAATCGAAATTTCCCATGTGACTCTGCTTTTGGGTTAGCTAAGGAGGCCATTATAGGATGA 642 0.4252 MLLVCVPHLCDIFYRMGLSNKDIVAMPGGHLLGISHPERSGFDGPWTEDPLKFDNSYFVELSKEDSAGLLKLPTGKALLDAPEFCNPISLYAMSLCPQRQLLLSPKDSTVLVHGAVGVVVTAVVVLPVLSSQKREVDSALLISLKYDICVTYNEKYWDQFRSFNICFLCTNRSNATKIDFAGLGSDKVLDMAITNRNFPCDSAFGLAKEAIIG 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0158 213 PRINTS Haem peroxidase superfamily signature 22 37 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal1g0158 213 PRINTS Haem peroxidase superfamily signature 46 61 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal1g0158 213 SUPERFAMILY Heme-dependent peroxidases 7 92 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal1g0158 213 Pfam Peroxidase 7 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal1g0158 213 Gene3D Peroxidase, domain 2 8 93 - -
Lal1g0158 213 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 6 92 IPR044831 GO:0004601|GO:0034599
Lal1g0158 213 PRINTS Plant ascorbate peroxidase signature 16 37 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal1g0158 213 PRINTS Plant ascorbate peroxidase signature 38 62 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal1g0158 213 PRINTS Plant ascorbate peroxidase signature 64 89 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal1g0158 213 PANTHER L-ASCORBATE PEROXIDASE 3 6 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0158 Lal-Chr1 1012706 1015199 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0158 K00434 - tcc:18607557 143.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0158 1 1012706 1015199 Lal1g0158 1 1012706 1015199 ECH
Lal1g0158 1 1012706 1015199 Lal9g0118 9 773130 776856 LSH