Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0151 ATGCGTAGAGAGATCTCGTTTCTCATTCAACCGCGCTGTCTCCTTCTCTTCCTTCTCCTTGCAATCTTCCTCGTTTTCGCATTCTCTGCCTCTAAACTGGCTCTGGAGAAAATAGAAGAGGACCCTGAAATTACACACAGAGTATTCTTTGATGTTGATATCGATAAACAACATTTAGGTAGGATCGTGATTGGATTATATGGCCAAGTTGTACCAAAAACTGTAGAAAATTTTAGAGCTTTATGCACAGGGGAGAAAGGCAAGAGTGCCAGTGGCTTAAAACTTCACTACAAAGGCACACCACTTCATAGGATAATATCTGGTTTCGTGATTCAGGGTGGGGACATTGTTCATCATGATGGCAAGGGATCTGAGTCTATCTATGGTGCCACCTTTCCTGATGAGAATTTCAAGATAAAACATTCTCATGCTGGCGTTGTCTCTATGGCGAATTCAGGACCTGATTCCAATGGTTCACAGTTTTTCATTACAACAGTAAAGGCCTATTGGTTGGATGGAGACCATGTTGTCTTTGGGAAGGTTGTCCAAGGCATGGATATTGTGTTTGCAATTGAAGGGGGAGCTGGAACCTACAGTGGAAAACCCAGAAAGAAGGTAGTTATTGCTGACTCTGGAGAGATACCCAAGAGCCAGTGGGATGATGAACGTTGA 672 0.4315 MRREISFLIQPRCLLLFLLLAIFLVFAFSASKLALEKIEEDPEITHRVFFDVDIDKQHLGRIVIGLYGQVVPKTVENFRALCTGEKGKSASGLKLHYKGTPLHRIISGFVIQGGDIVHHDGKGSESIYGATFPDENFKIKHSHAGVVSMANSGPDSNGSQFFITTVKAYWLDGDHVVFGKVVQGMDIVFAIEGGAGTYSGKPRKKVVIADSGEIPKSQWDDER 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0151 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 81 IPR002130 GO:0000413|GO:0003755
Lal1g0151 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 102 114 IPR002130 GO:0000413|GO:0003755
Lal1g0151 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 145 160 IPR002130 GO:0000413|GO:0003755
Lal1g0151 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 172 IPR002130 GO:0000413|GO:0003755
Lal1g0151 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 188 IPR002130 GO:0000413|GO:0003755
Lal1g0151 223 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 52 211 IPR002130 GO:0000413|GO:0003755
Lal1g0151 223 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 49 213 IPR002130 GO:0000413|GO:0003755
Lal1g0151 223 Gene3D - 35 220 IPR029000 -
Lal1g0151 223 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 21 222 - -
Lal1g0151 223 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 21 222 - -
Lal1g0151 223 SUPERFAMILY Cyclophilin-like 42 214 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0151 Lal-Chr1 971272 975170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0151 35 211 U-box Gene Family AT5G67530 40.449 1.67e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0151 - - gmx:100800775 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0151 1 971272 975170 Lal1g0151 1 971272 975170 ECH
Lal1g0151 1 971272 975170 Lal2g0093 2 580786 584202 LSH