Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0144 ATGGCTTCTCATGCTTCCTATTATGAAGTACTAGGAATTTCAATGGGTGCAAGCTGCCATGAAATAAAGTATGCTTACAGAAAACTTGCAAGGACATGTCACCCAGATGTAGTGGCTATGAATCAGAAGGAAAACTCAGGTAACAAATTCATGAAGATTAATTCAGCTTATTCAACTTTATCTGACCCAGATAAGCGTGCTCAATATGATAGAGAAATATATGGACACAGAAGATTACCAAAAATAGTTTCTATGTCTGGAAGGAAATGGGAAACTGACCAATGTTGGTAG 291 0.3711 MASHASYYEVLGISMGASCHEIKYAYRKLARTCHPDVVAMNQKENSGNKFMKINSAYSTLSDPDKRAQYDREIYGHRRLPKIVSMSGRKWETDQCW 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0144 96 PANTHER DNAJ PROTEIN HOMOLOG-LIKE 1 96 - -
Lal1g0144 96 SMART dnaj_3 5 65 IPR001623 -
Lal1g0144 96 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Lal1g0144 96 Gene3D DnaJ domain 1 87 IPR036869 -
Lal1g0144 96 PRINTS DnaJ domain signature 8 26 IPR001623 -
Lal1g0144 96 PRINTS DnaJ domain signature 26 41 IPR001623 -
Lal1g0144 96 PRINTS DnaJ domain signature 45 65 IPR001623 -
Lal1g0144 96 Pfam DnaJ domain 6 70 IPR001623 -
Lal1g0144 96 ProSitePatterns Nt-dnaJ domain signature. 50 69 IPR018253 -
Lal1g0144 96 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 96 - -
Lal1g0144 96 SUPERFAMILY Chaperone J-domain 3 74 IPR036869 -
Lal1g0144 96 CDD DnaJ 7 62 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0144 Lal-Chr1 941000 941290 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0144 7 70 C2H2 Transcription Factor Family AT1G74250 42.647 1.05e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0144 - - adu:107477115 145.976
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0144 1 941000 941290 Lal1g0144 1 941000 941290 ECH
Lal1g0144 1 941000 941290 Lal23g1470 23 15050988 15051491 ECH