Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0140 ATGGCTGCTACCGTTTCTGCTTGGTCCAAACCCGGTGCTTGGGCTCTCGATTCTGAGGAAAATGAATCTGAACTTCTTCAACCCCAATCCAATCAACCTGCTGTCTCTGATTTCCCTTCCCTCGCCGTCGCCGCTGCCACCAAACCCAAGAAGAAGAAGAAACCTCAGACCTTCTCTTTGGCTGAATTCACTGCCAAACCTGTTGAAGATCTTAATATCTTGTCTCTCCCCACCGCTCCTAGGCAACGAACTGCTGAGGAGCTTGAACTCGACCGCACTCGCCTTGGCGGTGGTTTCAGATCCTACGGCGACCGACCTGGAAGGAGTTCTGCTTCTGGCGGTGATGATGGTTCTAATTCTCGATGGGGCTCATCTAGGGTTTCTGATGAATCGAGGAGAAGTGGTTCGTTTGGGTCTAGGGATTTGAATCGTGATTCGGCTCCTTCAAGGGCTGATGAGATTGATAATTGGGCTTCTGTTAAGAAATCCATCGTTGGGAATGGGTTTGAGAGGAGAGAAAGGGATAGAGGAGGTTTTTTCGATTCTCAATCACGCGCTGATGAATCTGATAGCTGGGTTTCGAATAAGAGTGTTGTGGAGGGGCGGAGATTTGGTTCCAATGGTGGTGGGTTTGAACGAGAGAGGAAGGTAGGGTTTGGTTTCAGTGGTGCTGCGGATTCGGATAATTGGAATAAGAAAAAGGTTGAATCCAACATTGGAATTGGAAGTGGTAATGCTGGTGGTGGGTTTGAAAGAGAAAGAAAAGTAGGGTTTGGTACCAGCGGTGCAGCTGATTCGGATAACTGGAACAAGAAAAAGGTTGAATCCAACAGTGGAAGTGAAAGACCCGGGAGTGGTAGTGGTGGTGGTGGAAGGCCTAGACTTGTTTTGCAACCTAGGTCCATTTCGGCCACCAATCAAAGCAGCCCGGAGAATGGTTCTGGGAATGTGGCAAAGCCTAAGGGTCCAAATCCATTCGGAGAGGCGAAGCCAAGGGAGCAGGTTTTGGCGGAGAAAGGGCAAGATTGGAAGAAGATTGATGAACAGCTTGAGAGCGTGAAGATTAAGGAGACTGTCGAAAAAAGTGATGGTGGGTTTGGGAAGAAGGGCTCTGGTTCTGGCAATGGACATGCTACTCCGCCTGAAGATCGAACTGAGAAGAGTTGGAGGAAGGTTCTGCTTGCTGATCCTCGTCCAAAAAGTGCGGAGAAAGTGGAGGATGAGCATGTTGAAGAACACTGA 1242 0.4911 MAATVSAWSKPGAWALDSEENESELLQPQSNQPAVSDFPSLAVAAATKPKKKKKPQTFSLAEFTAKPVEDLNILSLPTAPRQRTAEELELDRTRLGGGFRSYGDRPGRSSASGGDDGSNSRWGSSRVSDESRRSGSFGSRDLNRDSAPSRADEIDNWASVKKSIVGNGFERRERDRGGFFDSQSRADESDSWVSNKSVVEGRRFGSNGGGFERERKVGFGFSGAADSDNWNKKKVESNIGIGSGNAGGGFERERKVGFGTSGAADSDNWNKKKVESNSGSERPGSGSGGGGRPRLVLQPRSISATNQSSPENGSGNVAKPKGPNPFGEAKPREQVLAEKGQDWKKIDEQLESVKIKETVEKSDGGFGKKGSGSGNGHATPPEDRTEKSWRKVLLADPRPKSAEKVEDEHVEEH 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0140 413 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 235 - -
Lal1g0140 413 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 213 403 - -
Lal1g0140 413 MobiDBLite consensus disorder prediction 22 37 - -
Lal1g0140 413 MobiDBLite consensus disorder prediction 166 183 - -
Lal1g0140 413 MobiDBLite consensus disorder prediction 19 38 - -
Lal1g0140 413 MobiDBLite consensus disorder prediction 76 413 - -
Lal1g0140 413 MobiDBLite consensus disorder prediction 380 413 - -
Lal1g0140 413 MobiDBLite consensus disorder prediction 299 315 - -
Lal1g0140 413 MobiDBLite consensus disorder prediction 133 157 - -
Lal1g0140 413 Pfam Plant specific eukaryotic initiation factor 4B 7 355 IPR010433 GO:0003743
Lal1g0140 413 MobiDBLite consensus disorder prediction 112 132 - -
Lal1g0140 413 MobiDBLite consensus disorder prediction 332 364 - -
Lal1g0140 413 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 235 IPR010433 GO:0003743
Lal1g0140 413 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 213 403 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0140 Lal-Chr1 926869 929548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0140 1 391 Eukaryotic Initiation Factors Gene Family AT4G38710 46.604 6.57e-60 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0140 - - lang:109325720 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0140 1 926869 929548 Lal1g0140 1 926869 929548 ECH
Lal1g0140 1 926869 929548 Lal2g0087 2 537099 546436 LSH