Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0138 ATGGGAAAATCCTCTATTTTCTGTGTGTTTGTTATTATCATCTTGTTGCTCTGTGTTCTGTCCGAAACTGCTATATCAGAAGATGATTCTGAAGCACTTCTAGCACTGAAATCATCCATTGATGTTCAAAACACACTTCCATGGCAAGAAGGAAGTGATGTGTGTAAATGGTTAGGAGTCAAAGATTGCTTCAACGGAAGGGTCAGAAAGCTAGTGCTAGAACACTCAAACTTAACTGGTACATTGGATTCAAAGATCTTAAACCGTTTGGATCAACTTCGAGTTCTCAGTTTCAAAGGAAACTCACTCTCAGGTCAAATCCCTAACCTCTCTGGCTTAATCAACCTCAAGTCACTGTTCCTCAACGACAACAACTTCTCCGGTGAGTTCCCAGCCTCCGTCACCGACCTCCACCGCGTCAAGGTTATTGTCTTATCAGGTAACAGAATCTCCGGCGAAATCCCGACGTCTCTGCTGAAACTCCGGCGACTCTATGTCCTTTACCTGCAAGACAACTTGTTCACAGGGACAATCCCGGGTTTCAACCAAACCGGACTCAGGTACCTGAATGTATCGGATAACCAACTTTCCGGCGAGATTCCGGTGACTCCTAGTTTAGTCCGGTTCAATGAATCGTCTTTTTATGGAAACCCAAGACTCTGCGGAGAACAGATTGAAAGAGCATGCAATAGCAGCAGTAGTGTTTCTCCACCGTCGATTAGTCCGAGTTATCCAATGAGACCAGAAGGGCATAAAAGTAAAAGAAGATGGAACCGTAAGAAAGTGATAAAAGTAATAGGAGGGAGTGTTGGTGGGGTTGTGTTGTTATTAATATGTGTGGTTTTGTCGTGGTGGGTTTGCAAGAATAGCAGAGGAAGCAGTGATGGGATTGGAGAGGTGGAAGAGAGAGAAGAAGGAGGTGGAAATGGTAATGGTGGTGGTGGTGGCAGAGATGGTAATAATGAAGGGAAAGAAGGGGTATTTACATGGGAGAATGAGGGTGTAGGGAAGTTGGTGTTCCTAGGAACAGGGGATAGAGAAATGAGATACAGCTTGGAGGATCTGCTGAAGGCATCAGCGGAGACATTGGGGAGGGGTATTATGGGAAGTACTTATAAGGCAGTGATGGAGTCAGGGTTCATAGTAACGGTGAAGAGGTTGAAAGATGCTACATATCCAGGGTTGGAAGAGTTTAAGAAAGAGATTGAGATAATTGGAAGGCTAAGACACCCTAATTTGGTACCACTAAGGGCTTATTTTCAAGCTAAGGAAGAACGTCTTTTAGTTTATGATTATTTCCCTAATGGAAGCCTCTTCTCTCTCATTCATGGATCAAAAACAACCGGTGGGGGAAAGCCTCTTCACTGGACATCCTGCCTTAAAATTGCAGAAGATCTTGCAACCGGCATGCTCTATATCCACCAGACGAACCCAGGCTTAATTCATGGAAACCTGAAATCTTCCAATGTCTTGCTTGGTTCTGACTTTGAGTCCTGTCTTACTGATTATGGTCTTACTATGTTCCTTAATCCTGACTCAATGGATGAACCTAGTGCCACTTCTTTATTCTATAGAGCGCCCGAATGCCGTAGCTTTCAGAGGCCACACACTCAACCAGCCGATGTATACAGCTTCGGTGTCCTTCTCCTTGAGCTTTTGACCGGAAAAACACCCTTTCAAGACCTTGTTCAGGCACACGGTTCAGACATACCTAGGTGGGTTCGGTCGGTGCGTGAAGAAGAGACCGAGTCAGGGGATGACCCAGCCTCAGGGAATGAAGCATCAGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCAATGACTTGTGTTTCACTAGTACCGGAGAATAGGCCTACAATGCGAGAAGTTTTAAAGATGATAAGAGATGCAAGAGGTGAAGCTCATGTTTCATCTAATAGTAGTGATCATTCACCTGGTAGATGGTCAGATACTGTTCAAAGCATTCCAAGGGAAGAACACCTGAGCATATGA 1992 0.4463 MGKSSIFCVFVIIILLLCVLSETAISEDDSEALLALKSSIDVQNTLPWQEGSDVCKWLGVKDCFNGRVRKLVLEHSNLTGTLDSKILNRLDQLRVLSFKGNSLSGQIPNLSGLINLKSLFLNDNNFSGEFPASVTDLHRVKVIVLSGNRISGEIPTSLLKLRRLYVLYLQDNLFTGTIPGFNQTGLRYLNVSDNQLSGEIPVTPSLVRFNESSFYGNPRLCGEQIERACNSSSSVSPPSISPSYPMRPEGHKSKRRWNRKKVIKVIGGSVGGVVLLLICVVLSWWVCKNSRGSSDGIGEVEEREEGGGNGNGGGGGRDGNNEGKEGVFTWENEGVGKLVFLGTGDREMRYSLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDATYPGLEEFKKEIEIIGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTTGGGKPLHWTSCLKIAEDLATGMLYIHQTNPGLIHGNLKSSNVLLGSDFESCLTDYGLTMFLNPDSMDEPSATSLFYRAPECRSFQRPHTQPADVYSFGVLLLELLTGKTPFQDLVQAHGSDIPRWVRSVREEETESGDDPASGNEASEEKLQALLNIAMTCVSLVPENRPTMREVLKMIRDARGEAHVSSNSSDHSPGRWSDTVQSIPREEHLSI 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0138 663 Gene3D Transferase(Phosphotransferase) domain 1 433 650 - -
Lal1g0138 663 SUPERFAMILY L domain-like 26 222 - -
Lal1g0138 663 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Lal1g0138 663 MobiDBLite consensus disorder prediction 637 663 - -
Lal1g0138 663 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 653 - -
Lal1g0138 663 SUPERFAMILY Protein kinase-like (PK-like) 361 635 IPR011009 -
Lal1g0138 663 Pfam Leucine rich repeat 115 173 IPR001611 GO:0005515
Lal1g0138 663 Pfam Leucine rich repeat N-terminal domain 27 60 IPR013210 -
Lal1g0138 663 Gene3D Ribonuclease Inhibitor 183 232 IPR032675 -
Lal1g0138 663 MobiDBLite consensus disorder prediction 231 253 - -
Lal1g0138 663 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 3 653 - -
Lal1g0138 663 MobiDBLite consensus disorder prediction 634 663 - -
Lal1g0138 663 MobiDBLite consensus disorder prediction 292 326 - -
Lal1g0138 663 Pfam Protein kinase domain 360 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0138 663 Gene3D Phosphorylase Kinase; domain 1 339 432 - -
Lal1g0138 663 ProSiteProfiles Protein kinase domain profile. 357 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0138 Lal-Chr1 905561 910441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0138 4 663 Receptor kinase-like Gene Family AT1G60630 61.435 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal1g0138 Pkinase 4.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0138 - - gmx:100809866 990.719