Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0107 ATGGATTCACCTAATAATTCCCAAGTAGTTGAGCAGTTTCCGAGGCGTGTTGAAGGTTATGAGGCAAGGTGCTTAGTTCATAAGATGTCTTTAGACACCAAACTTATTACCTTCTTTGGTGCCCATGAACTTTTCAGAATAGAGACTTGGAAGTCAGCTATGACAGAACTAGTGGCAACTGCATGTCTAATGTTTACCTTAACAACTACAATTATTGCATGTTTGGACTCACATGAAGTTGATCCTAAGTTTCTTGTTCCTTTTGTAGTCTTCATCATAACCTTCTTATTCCTTATAGTCACAGTTCCTCTATCTGGTGGCCATATGAACCCTCTCATCACATTCATAGCCACTCTAAAGGGTCTTCTCACTCTTTCTCGTGCTCTCATTTACATGTTAGCACAATGCATGGGTTCAATAATTGGTTTCTTCATTATTAAGACTGTGATGGAACCAAAATTAGTACAAATATATTCTTTGGGAGGGTGTGCAATTAGTGGCATAAAGCACCAAGAAGCTTTGTTATTAGAATTTTCATGCACGTTTGTGGTACTCTTTATAGGTATGACTTTAGCATTTGATAAGAAAAAATCCAAGGATTTGGGGTTGCCAGTGGTGTGTTTGGTGGTGGCAGGGGCCATGGGCCTGGTAGTATTTGTGTCAATAACTGTAACTGGGCAACCAGGCTATGCTGGTGTGGGCTTAAACCCAGCAAGATGTTTGGGCTCAGCATTGCTTTATGGAGGCCCGTTGTGGAATGGGCATTGGGTTTTCTGGGTTGGGCCTTTCTTGGCCTGCATGGGATATTATGCTGTCTCCATAAACCTACCAAAGCAAGGTCTTTCTTAA 849 0.4134 MDSPNNSQVVEQFPRRVEGYEARCLVHKMSLDTKLITFFGAHELFRIETWKSAMTELVATACLMFTLTTTIIACLDSHEVDPKFLVPFVVFIITFLFLIVTVPLSGGHMNPLITFIATLKGLLTLSRALIYMLAQCMGSIIGFFIIKTVMEPKLVQIYSLGGCAISGIKHQEALLLEFSCTFVVLFIGMTLAFDKKKSKDLGLPVVCLVVAGAMGLVVFVSITVTGQPGYAGVGLNPARCLGSALLYGGPLWNGHWVFWVGPFLACMGYYAVSINLPKQGLS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0107 282 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 21 281 - -
Lal1g0107 282 Gene3D Glycerol uptake facilitator protein. 35 276 IPR023271 -
Lal1g0107 282 PRINTS Major intrinsic protein family signature 51 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal1g0107 282 PRINTS Major intrinsic protein family signature 90 114 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal1g0107 282 PRINTS Major intrinsic protein family signature 127 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal1g0107 282 PRINTS Major intrinsic protein family signature 176 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal1g0107 282 PRINTS Major intrinsic protein family signature 217 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal1g0107 282 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal1g0107 282 SUPERFAMILY Aquaporin-like 42 266 IPR023271 -
Lal1g0107 282 Pfam Major intrinsic protein 46 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal1g0107 282 PANTHER AQUAPORIN-LIKE 21 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0107 Lal-Chr1 717721 718883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0107 43 266 Major Intrinsic Protein MIP AT3G61430 31.466 2.96e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0107 K09866 - gmx:100804160 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0107 1 717721 718883 Lal1g0107 1 717721 718883 ECH