Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0106 ATGGATGTGGTTGTGAACAATGGAGTTCATCAAGATCTGGCATTGTCTTATGAGACAAAAAAGGAGAACTCCTTATGGTTAAAATTCCTTGCTTTCATTGGCGCCCATGAATTTCGGTCTGCAGAGATGTGGAGGGCAGGGCTTACAGAAATGGTAGGAAGTACCTTTGCTACGTTTGCACTAGTTGGTTCCATCATTGGCTGCATGAACTCAAATGTGGCTGCACCTGTGCTTTTGGTTCCAATAGTTGTATTTTTTGTAACCTTCTTTATCCTCATTGCAGTGGCTCCTATATCTGGGGGTTTTATAAACCCTACTTTCACATTCATAGCTTCTCTCAAGGGAGTGCTAACAATATCTCGTGCTATTGTCTACATTGTTGCACAGTTCATTGGCACAACAATTGGGTTTCTTTTACTCAAGACTGTGATGAGTCATGATATGTCACTAAAGTACTTGTTAGCAGGGTGCACCATCAATGCCTATGGTGGAACATCTGGCATAAGCCCTAGTACCGCTTTTGTACTAGAGTTTTCATGCACATTCTTGATGTGTTTGATCGGTGTAACTGTAGCATTTGACAAGAAAAGGAGCAAAGAATTAGGGCCAATAATGGTTTACATTGTGGTGGGTGGATGCATTGCTCTCCCAGTACTCATTTCATCAACAATCACAGGAAGTGTTGGTTATAGTGGAGCTGGATTGAACCCTGCAAGGTGCTTAGCACCAGCGTTACTCTATGGAGGTCCACAACTATGGAATGGGTTTTGGGTTTTCATGTTAGGCCCTTTCTTTGCTTGCATTATGTATTATATATTTTCTATCAACTTACCAAAGGAGGGGTTGAAGGGGAGTATGATATCTCAAAGCTAG 873 0.4181 MDVVVNNGVHQDLALSYETKKENSLWLKFLAFIGAHEFRSAEMWRAGLTEMVGSTFATFALVGSIIGCMNSNVAAPVLLVPIVVFFVTFFILIAVAPISGGFINPTFTFIASLKGVLTISRAIVYIVAQFIGTTIGFLLLKTVMSHDMSLKYLLAGCTINAYGGTSGISPSTAFVLEFSCTFLMCLIGVTVAFDKKRSKELGPIMVYIVVGGCIALPVLISSTITGSVGYSGAGLNPARCLAPALLYGGPQLWNGFWVFMLGPFFACIMYYIFSINLPKEGLKGSMISQS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0106 290 PANTHER AQUAPORIN-LIKE 19 283 - -
Lal1g0106 290 SUPERFAMILY Aquaporin-like 36 269 IPR023271 -
Lal1g0106 290 Pfam Major intrinsic protein 37 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal1g0106 290 Gene3D Glycerol uptake facilitator protein. 31 281 IPR023271 -
Lal1g0106 290 PRINTS Major intrinsic protein family signature 45 64 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal1g0106 290 PRINTS Major intrinsic protein family signature 84 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal1g0106 290 PRINTS Major intrinsic protein family signature 121 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal1g0106 290 PRINTS Major intrinsic protein family signature 217 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal1g0106 290 PRINTS Major intrinsic protein family signature 257 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal1g0106 290 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 19 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0106 Lal-Chr1 715616 716660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0106 37 275 Major Intrinsic Protein MIP AT3G61430 30.328 1.44e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0106 K09866 - lang:109325087 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0106 1 715616 716660 Lal1g0106 1 715616 716660 ECH