Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0099 ATGTCGACCAAGCGCGCCAACCGCGACGACGCTGATTCCCCCGGCGAAGGACCATCCTTCAAGAGACAGAACTCCGCACGCAATTTCCCCGGCGATAAGACGGTGGAGTCTGGCGACGGACACGAGGATGAACAAACATTCGAACCAGAACCTCAATCCCATGGTGAATCAACTGGTCTCAAACTCTTAGGGCTTTTACTCCAATGTGCTGAGTGCGTCGCCATGGATAACCTTGACTTCGCCAACGACCTCTTACCGGAGATCGCAGAGCTCTCATCGCCGTATGGTACTTCGCCGGAGCGTGTCGGAGCTTACTTCGCTCAGGCGCTGCAAGCACGCGTTGTGAGTTCTTGCCTCGGAACCTACACGCCACTCTCGACCAAATCGGTAATCCTAACTCAATCGCAGCGAATCTTCAACGCCTTCCAATCCTACAACTCGGTTTCACCGTTAGTGAAGTTCTCTCACTTCACCGCGAACCAAGCCATATTCCAAGCCTTAGAAGGCGAAGATTGCGTCCACATCATCGATCTCGATATCATGCAGGGACTTCAATGGCCAGGATTGTTCCACATCCTCGCGTCGCGTTCCAAGAAGATCCGCTCCATGAGGATCACCGGTTTCGGATCCTCATCGGAGCTGTTAGAATCCACAGGGAGAAGACTCGCCGATTTCGCGAGTTCACTCGGTTTACCCTTCGAGTTTCAGCCAGTTGAGGGTAAAATCGGAAGCGTAACGGAACTGAGTCAACTCGGCGTGAGGCCTCACGAGGCAACCGTGGTTCACTGGATGCACCATTGCCTTTACGATATAACAGGGAGTGATTTAGGAACGTTGAGATTGCTGACTCAGCTGAGGCCAAAACTGATCACAACCGTTGAACAAGATCTGAGCCACGCTGGGAGCTTCCTCGCGCGGTTCGTAGAGGCTTTGCATTATTACAGCGCGTTGTTCGACGCGCTTGGGGATGGATTGGGTGCGGACAGCATAGAGAGGCATACGGTGGAGCATCAGTTACTGGGATGTGAGATTAGAAACATCGTGGCGGTTGGTGGACCGAAGAGGAGTGGGGAAGTTAAGGTTGGGAGGTGGGGAGAGGAATTGAGACGGGTCGGGTTTCGACCCGTTTCTCTTAGGGGTAACCCGGCTTCACAAGCAAGTTTGTTGCTTGGGATGTTCCCTTGGAGAGGGTATACCCTTGTGGAGGAAAATGGTTCACTTAAGCTTGGGTGGAAGGATTTGTCTCTGTTGACTGCCTCTGCTTGGCAACCGTCAGATTTGATTACTTATACTGATTGA 1299 0.5258 MSTKRANRDDADSPGEGPSFKRQNSARNFPGDKTVESGDGHEDEQTFEPEPQSHGESTGLKLLGLLLQCAECVAMDNLDFANDLLPEIAELSSPYGTSPERVGAYFAQALQARVVSSCLGTYTPLSTKSVILTQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALEGEDCVHIIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLESTGRRLADFASSLGLPFEFQPVEGKIGSVTELSQLGVRPHEATVVHWMHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGADSIERHTVEHQLLGCEIRNIVAVGGPKRSGEVKVGRWGEELRRVGFRPVSLRGNPASQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLTASAWQPSDLITYTD 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0099 432 MobiDBLite consensus disorder prediction 1 56 - -
Lal1g0099 432 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 424 IPR005202 -
Lal1g0099 432 MobiDBLite consensus disorder prediction 34 50 - -
Lal1g0099 432 MobiDBLite consensus disorder prediction 1 16 - -
Lal1g0099 432 ProSiteProfiles GRAS family profile. 53 423 IPR005202 -
Lal1g0099 432 Pfam GRAS domain family 64 423 IPR005202 -
Lal1g0099 432 PANTHER SCARECROW-LIKE PROTEIN 23 52 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0099 Lal-Chr1 682970 684268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0099 1 426 GRAS Transcription Factor Family AT5G41920 65.358 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal1g0099 GRAS 1.1e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0099 - - gmx:100816249 727.628