Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0095 ATGATGTCATTTTCACCTAGCTTAGAATCTCCACAATCCTTGCTTAGAGATGCGAAATCTGAGGAAAGGGGTTTATGTTTGATCCATTTGTTGCTCACATGTGGAAAGCATGTTGCTAATGGTAACCTTGAAAATGCAAATACAATATTTGAGCAAATTTCCCTGCTTGCATCTCCTGATGGAGATACTATGCAGCGGATTGCAGCATATTTCACTGAAGCACTCGCGGATCGAATACTTAAGTCGTGGCCTGGGATCCATAAAGCACTCAATTCAACTAGGATGACAATGATTTCTGAGGAAATTCTTGTTCAGAAGTTGTTCCATGAGCTTTTCCCTTTCTTGAAGTTAGCATTTGTTTTGACAAATCAAGCTATAGTTGAAGCAATGGAAGGGGAGAAAATGATTCATATAATTGATCTCAATACTGCTGAACCTTCTCAGTGGATTGCTCTGTTCCAAGTTTTGAGTGCTCGCCCCGAAGGCCCTCCTCATTTGAGAATTACTAGTGTTCATCAGAAGAAAGAGATTCTGGATCAGATAGCTCATAAGCTGATTGAAGAAGCAGAAAAGTTGGATATACCATTCCAATTCAATCCTATAGTCAGCAAATTAGAAAATCTTGATTTCGATAAACTTCGTGTAAAAACTGGTGAAGCACTAGCAATAAGTTCTATTCTCCAATTACATTCCTGTCTAGCCTTGGACAATGAAGCCATGCAGAGAAAATCTCCTCTTTTGTTAAACAGCGCCAACAGAATTCACCTGCAAAGAGTTCTGCCTATGAACCAAAGCACATTGGGTGATTTGGTTGAGAAAGATATGGTTAATAGTTATACCCCTAGTCCTGACTCAACTTCATCACCATTGTCTTTAACTACTTCAAATTCAATGAATATGGAGAAGTTTCTTAATGCTTTAAGGGGATTATCACCAAAGGTCATAGTTGTAATGGAACAAGACTCGAATCATAATGGTTCGACTCTGATGGAGAGGCTGCTAGAATCACTATATACTTATGCAGCATTGTTTGATTGCTTGGAATCCACAGTGTCAAGAGCATCATTGGAGAGATTAAGGGTGGAGAAGATGCTTTTTGGAGAGGAAATCAAGAACATTATTGCTTGTGAGGGGAGTGAAAGAAAGGAAAGACATGAAAAGCTGGATAAGTGGTTCCAGAGATTTGAATTAGTTGGGTTTGGTAATGTGCCTTTAAGCTATTTTGGTAAGTTGCAAGCAAGTAGGTTCCTACAAAGGTGTGATTGTGAGGGATATAGAATGAGGGAGCAAAATGGCTGTGTACTAATTTGTTGGCAGGATAGGTCATTGTTTTCAATATCAGCTTGGAGATCTATGAAGTAA 1362 0.3899 MMSFSPSLESPQSLLRDAKSEERGLCLIHLLLTCGKHVANGNLENANTIFEQISLLASPDGDTMQRIAAYFTEALADRILKSWPGIHKALNSTRMTMISEEILVQKLFHELFPFLKLAFVLTNQAIVEAMEGEKMIHIIDLNTAEPSQWIALFQVLSARPEGPPHLRITSVHQKKEILDQIAHKLIEEAEKLDIPFQFNPIVSKLENLDFDKLRVKTGEALAISSILQLHSCLALDNEAMQRKSPLLLNSANRIHLQRVLPMNQSTLGDLVEKDMVNSYTPSPDSTSSPLSLTTSNSMNMEKFLNALRGLSPKVIVVMEQDSNHNGSTLMERLLESLYTYAALFDCLESTVSRASLERLRVEKMLFGEEIKNIIACEGSERKERHEKLDKWFQRFELVGFGNVPLSYFGKLQASRFLQRCDCEGYRMREQNGCVLICWQDRSLFSISAWRSMK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0095 453 PANTHER BNAA06G02820D PROTEIN 357 452 IPR030008 GO:0003700|GO:0005634|GO:0009739
Lal1g0095 453 PANTHER BNAA06G02820D PROTEIN 300 352 IPR030008 GO:0003700|GO:0005634|GO:0009739
Lal1g0095 453 PANTHER BNAA06G02820D PROTEIN 6 243 IPR030008 GO:0003700|GO:0005634|GO:0009739
Lal1g0095 453 Pfam GRAS domain family 27 450 IPR005202 -
Lal1g0095 453 ProSiteProfiles GRAS family profile. 18 450 IPR005202 -
Lal1g0095 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 300 352 IPR005202 -
Lal1g0095 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 243 IPR005202 -
Lal1g0095 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 357 452 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0095 Lal-Chr1 654642 656003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0095 10 453 GRAS Transcription Factor Family AT1G50420 64.143 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal1g0095 GRAS 7.6e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0095 - - gmx:100814131 731.865