Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0086 ATGGAAATAGAAGAAAGCAGTAGTAGAAAGAAAGAGGTGATATATGGTGGGCTTAATAATAGGGGAAGCTACTTGGTATGGGAAGATCTAAGAGTGATTATACCAAATTTTGGGAAGGGAGCAACAAAGAGATTGCTTAATGGGATAAATGGTTATGCTGAGCCTGGTAGAATCACTGCTATTATGGGTCCTTCTGGCTCTGGAAAATCCACCCTTCTTGATTCACTAGCAGGTAGACTCTCAAAAAATGTGGTGATGACTGGAAATGTTCTTCTCAATGGAAAGAAGCAAAGCCTGGGCTATGGTTTTGTTGCATACGTAACACAAGAGGATGTGCTGCTAGGAACTCTAACAGTGAAGGAAACAATATCTTATTCAGCTAATCTCCGTCTTCCAACAACAATGACCAAAGAAGAAGTTGAGAGCATAGTAGATGGAACAATCATAGAAATGGGTCTCCAAGATTGTGCTGATAGATTAATTGGTAATTGGCATTTGAGAGGGATAAGTGGTGGTGAGAAGAAAAGGGTTAGCATTGCACTTGAGATACTTACAAGGCCTAGCTTATTGTTTCTTGATGAACCAACTAGTGGTCTTGATAGTGCTTCAGCATTTTTTGTTGTTCAAACTCTTAGAAATGTTGCTTCTGATGGAAGGACTGTTATCTCTTCTATTCATCAGCCTAGCAGTGAAGTCTTTGCACTCTTTGATGACCTCTTCTTGCTTTCTGGTGGTGAAACTGTTTATTTTGGAGAAGCTAAATCTGCAGTTGAGTTTTTTGCTGAAGCTGGTTTTCCTTGTCCACGTAAAAGAAATCCTTCTGATCACTTCCTAAGGTGTATCAATTCTGATTTCGATATTGTAACAGCTACACTGAAGGGATCTCAGAGAATTCCTGATGTTCCAAATTCATCAGATCCTTTCATGAATTTGGCTACAGCAGAGATTAAGGCAATGCTGGTTGAGAGATATAGACGTTCAACTTATGCCAAAAGGGCAAAATCCAAGATTCTAGAACTATCTACCAAGGAAGGACTTGAAAGTGAGGCACAGAATGGAAGTCAAGCTAGTTGGTGGAAGCAACTATCAACCTTGACAAAAAGATCAATGGTCAACATGTGTAGAGATGTTGGTTACTATTGGTTGAGGATCATAATCTACATCATTGTATCTATATGCGTTGGAACTATTTATTTTGACATTGGCTATGGCTACACTTCAATTCTGGCTCGTGGTGCCTGTGGTGCATTTATATCAGGATTCATGACATTCATGTCAATTGGAGGTTTTCCATCATTCATTGAAGAAATGAAGGTCTTTTATAGAGAAAGGCTTAATGGATATTATGGAGTTGCAGCATATATATTAGCCAACTTTCTATCCTCTTTCCCATTCTTGATTGCTATTGCTCTTACTAGTAGCACCATTACTTATAACATGGTGAAATTCAGGCCAGGATTCATTCACTTTGTGTTTTTTACTCTCAACATCTTAAGCTGCATCTCAGTAATTGAAAGCCTCATGATGGTTGTGGCTTCACTTGTTCCAAATTTCCTAATGGGAATAATTACAGGGGCTGGATTAATTGGAATCATGATGATGACCTCTGGATTCTTCAGGTTGCTGTCTGATCTTCCGAAACCAGTTTGGCGCTACCCGATTTCATATATCAGTTATGGCGCATGGGCAATCCAGGGTTCCTACAAGAATGATTTGCTTGGACTTGAGTTTGAACCTTTGATACCCGGTGACCCAAAATTGAGTGGAGAATATGTGATCACACACATGTTAGGCATTGAATTAGACCATTCCAAGTGGTGGGACCTAGCAGCACTATTAATCATTCTCATATTTTACAGAATTCTGTTCTTTACCATTCTCAAGTTCAAGGAGAGAGCATCCCCACTATTTAAGTCACTTTATGCAAAGAGAACCATACAGCAGCTTGAAAAGAGACCTTCTTTCAGGATGGTGCCATCTTTCCCTTCACAAAGGCATCAACCCCTTCGTTCACTCTCTTCTCAAGAGGGTCTTAATTCTCCACTAAACTAG 2052 0.3962 MEIEESSSRKKEVIYGGLNNRGSYLVWEDLRVIIPNFGKGATKRLLNGINGYAEPGRITAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNVLLNGKKQSLGYGFVAYVTQEDVLLGTLTVKETISYSANLRLPTTMTKEEVESIVDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRVSIALEILTRPSLLFLDEPTSGLDSASAFFVVQTLRNVASDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKSAVEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIPDVPNSSDPFMNLATAEIKAMLVERYRRSTYAKRAKSKILELSTKEGLESEAQNGSQASWWKQLSTLTKRSMVNMCRDVGYYWLRIIIYIIVSICVGTIYFDIGYGYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILANFLSSFPFLIAIALTSSTITYNMVKFRPGFIHFVFFTLNILSCISVIESLMMVVASLVPNFLMGIITGAGLIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGSYKNDLLGLEFEPLIPGDPKLSGEYVITHMLGIELDHSKWWDLAALLIILIFYRILFFTILKFKERASPLFKSLYAKRTIQQLEKRPSFRMVPSFPSQRHQPLRSLSSQEGLNSPLN 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0086 683 MobiDBLite consensus disorder prediction 658 683 - -
Lal1g0086 683 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 21 678 - -
Lal1g0086 683 MobiDBLite consensus disorder prediction 660 683 - -
Lal1g0086 683 ProSitePatterns ABC transporters family signature. 169 183 IPR017871 GO:0005524
Lal1g0086 683 Gene3D - 23 263 IPR027417 -
Lal1g0086 683 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 21 678 - -
Lal1g0086 683 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 25 269 IPR003439 GO:0005524
Lal1g0086 683 SMART AAA_5 55 245 IPR003593 -
Lal1g0086 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 261 IPR027417 -
Lal1g0086 683 Pfam ABC-2 type transporter 361 570 IPR013525 GO:0016020|GO:0140359
Lal1g0086 683 CDD ABCG_EPDR 22 251 - -
Lal1g0086 683 Pfam ABC transporter 46 197 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0086 Lal-Chr1 604525 612185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0086 53 238 Calmodulin-binding Proteins AT2G36910 31.707 8.47e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0086 K05681 - gmx:100807692 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0086 1 604525 612185 Lal1g0086 1 604525 612185 ECH
Lal1g0086 1 604525 612185 Lal2g0046 2 267950 273348 LSH