Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0074 ATGGCATACATGTGTGCAGATAGTGGAAACCTTATGGCCATTGCTCAACAAGTTATTAACCAAAAACAACAACAAGAGCAACAACAACATCAACAAAACCAAAACCCTCCTCTTTCATGGAACACCAACAACAACAATACTCCACCACCTTTGTCTTTGTCTTTGTCTTCTTTGCCTTTAGGGTATCCCTTAACTCCTCCCTCTGATTTCCCTGACTCATTCCTTCAAGTCCCTGATGACCCTTCTTCCTTCCACTTCCCTCCACCTCCTTTCAAATTCTCTGACTTCGACGATGACTGGATGGACTCTCTTATTCCCACCTCCGAAAACACTCACAATTCCGATTTTACCCTTCACCCTTCTCCCACCCTTCTCAACCGCCCCTTCTCTTCCTCTCCACCACCACCCTCTCCGCCGGTTACTCTCCACGCCACCCAACCCCACTCCGCATCACACCCACTTCTCAATTCGCTAATTGATTCTGCTACTCTCATCGATTCTTCTTCACCAGATCTTGCTTTACAATCACTTGCCCAGTTAACCAAATCAGTGTCCCAACATGGAAACCCTATCCAGAGAGTGGCTTTCTACTTTGTTGAGGCTCTCACAAGGAAACTTGATGAAAAAGGCAACAATTTTATAACTGGGGTCACTCACACTCATTCTATTTCTGAAGAGTTAACACTGTGTTACAAGGCTTTGAATGATGCATGCCCTTATTCAAAGTTCGCTCATTTAACAGCTAATCAAGCTATTCTTGAAGCCACACAAGCTTCCACACACATTCACATAGTTGATTTTGGAATTGTTCAAGGGATTCAGTGGGCTGCTTTGTTACAAGCTTTTGCAACTCGTTCTTCTGGTAAGCCTCAAAGTGTAACCATTTCTGGGATTCCAGCTATGGCTCTTGGAACTTCACCTGCTAATTCTCTTGCTGCCACTGGGAACCGTTTATCTGAGTTTGCTAAGCTTTTGGGATTGACTTTTGAGTTTAGACCAATTCTCACACCTATTCATGAGCTCAATGAGAAAAGCTTTTGTCTGAAACCAAACGAAGCTTTGGCTGTTAACTTCATGCTTCAGTTGTATAATCTATTGGATGATGATAATGATGAAGGTGGTGATGCTCCTAATGCAGTTCAAACTGCACTGAATTTGGCTAAGTCTTTGAAGCCTAACATTGTTACTCTAGGAGAATATGAAGCTAGTTTAACAACCAGGGTTGGGTTTTTGAACAGATTCAAGGCTGCATTGAAGTATTTCTCTGCAGTGTTTGAGTCTCTTGATCCTAATTTGCCTGCAGATTTACCTGAGAGGTTACAGGTGGAAAGTCTTTTACTTGGGCGGCGAATTGCCGGTGTCGTTGGATCAGAGGTTCCAGGGAGTGTGAGAGAAAGAATGGAGGATAAAGAGCAGTGGAGGGTGCTGATGGAAAGTGCTGGTTTTGAATCAGTGAGTCTCAGCCATTATGCAATTAGTCAGGCTAAGATTCTCCTATGGAATTATAGCTATAGCTCTCTGTATTCACTTGTTGAATCTGAGCCTGGATTTTTGTCTCTAGCTTGGAAAGATGTTCCTCTGTTAACCGTTTCTTCATGGCGTTAA 1605 0.4318 MAYMCADSGNLMAIAQQVINQKQQQEQQQHQQNQNPPLSWNTNNNNTPPPLSLSLSSLPLGYPLTPPSDFPDSFLQVPDDPSSFHFPPPPFKFSDFDDDWMDSLIPTSENTHNSDFTLHPSPTLLNRPFSSSPPPPSPPVTLHATQPHSASHPLLNSLIDSATLIDSSSPDLALQSLAQLTKSVSQHGNPIQRVAFYFVEALTRKLDEKGNNFITGVTHTHSISEELTLCYKALNDACPYSKFAHLTANQAILEATQASTHIHIVDFGIVQGIQWAALLQAFATRSSGKPQSVTISGIPAMALGTSPANSLAATGNRLSEFAKLLGLTFEFRPILTPIHELNEKSFCLKPNEALAVNFMLQLYNLLDDDNDEGGDAPNAVQTALNLAKSLKPNIVTLGEYEASLTTRVGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAGVVGSEVPGSVRERMEDKEQWRVLMESAGFESVSLSHYAISQAKILLWNYSYSSLYSLVESEPGFLSLAWKDVPLLTVSSWR 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0074 534 MobiDBLite consensus disorder prediction 107 126 - -
Lal1g0074 534 Coils Coil 15 35 - -
Lal1g0074 534 MobiDBLite consensus disorder prediction 107 148 - -
Lal1g0074 534 MobiDBLite consensus disorder prediction 22 54 - -
Lal1g0074 534 ProSiteProfiles GRAS family profile. 145 534 IPR005202 -
Lal1g0074 534 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 155 533 - -
Lal1g0074 534 Pfam GRAS domain family 155 534 IPR005202 -
Lal1g0074 534 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 155 533 IPR005202 -
Lal1g0074 534 MobiDBLite consensus disorder prediction 127 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0074 Lal-Chr1 543987 545591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0074 1 534 GRAS Transcription Factor Family AT5G66770 51.672 1.25e-165 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal1g0074 GRAS 9.1e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0074 - - vra:106779206 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0074 1 543987 545591 Lal9g0053 9 324150 325646 LSH