Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0060 ATGGCTCCTTCTTCCCCCAGCGTCGCTGATACACTGTCTCCATCATCAACACCCGTAAATTCAGACAATGATCTTCAGCCATTCTTTGTTCTTCACAAAGCATCATCTCAAAGAAAAGATAAAGCATCAACAAGGCAGGGAAAAGTGCGAAAGAGAAATGAGTTATCTTTGTCATCACCACAAAGCACAAAGAAACTGGAAGGAAGTACGATTGAAGAATGTGATCACCATTTATTTCAGCAACTAAAGATTGAAGCTTTTGGCAATGTTTGGACAAAAATTGAATCTACCATTAAGGACGTTTTGAGAGATCTCAATACTAGTGTATTTAATGATATACAACAATGGGTTTTGGAATGCTTCAATGCTACTGCGTTGATCGGAGAACTTAGTGTCGCTGAAGCAACTTGTTCTTTTCCTGCTCTAAACAATACCAATCCTGGGAAACTGTTCACTGCATTGGTTATAACCAGAAACATAGAGTTTGTTGATGACATATTGACATTTGAAGAGCTTGGACATTTCTTGAAATCCCAAGGATGTCATGTGGCTGTGCTTTCATCAATAGAATTCTCAGTAAAAAATGGGATTGCTGGTTGCTTAAAAGCTTTATTGCGAGAGTTTATAGCTGGTGCTATTGATGTGCGTGCTTCTGAACTTGTGTATTATAAGATCAATTTTATCTACTTCTGTTGTCTCCTTTACTTTTTTCCTTTTCTTAATGCTGTTGTCAATCAGTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACAAGACCACTACAATAAACCACTAGTGCTGATCATTAATGATTTGGAAAGATGTTGTGGATCAGTCTTAACTGATTTCATCCTGATGTTGAGTGAATGGGTTGTCAAGGTGCCAATCATGTTGATAATTGGAGTTACAACCACAGTGGATAACACCAGAAACATTCTGCCGTCACAAGCTCTTGAGCGTTTGTGCTCATCTAAGTTTTTGCTTGGAACACCAGCTGAGAAAATGGATGCAATTGTTGAGGCTGTTCTTGTGAAACAGTGTACTACGTTTAATATTGGTCATAAGGTGGCACTCTTTCTGCGAAACTACTTCATCAACCAGGATGGGACATTGACATCTTTCATAAAAGCTTTGAAGGTGGCATGCTTATTACATTTCTCTATGGAACCTCTGAGTGTCATCCATGGGCGACTCGCTGAAGACCAAAAGGAGAAGTGTGCATTATCACCTGAGACTATGCTGAAATACATGGATGAACTTCCAACTGTTGAAAGGAATCAAATGGTTGATCAGACTGGAAAGAGCATGGCTCAGAGTTTGTCAGAAGTTCTGACAGTGCGGAAGTTATGGAGCACTGCTGTCCTTTGCCTACATGAAGCTGCAAAATATAGCAGAGTACGTTTGCTGGATTTGTTTTGTGAAGTGCTCAATCCAGATTTGTACCTGTCAAGGGATTCTGATTGTGGTGTCGGGGATGAAAAAGAATCCGGGCTGTCCTCAACGGGTGACCCCTGTCAACAATATTCTGTCATGCAAAGCAGTACTTTTATTTGCCAGATAGTGCGCAAAGTAAGGGATCTCCCTTCAGGAAGGCTACACCAGTTGATTAAGACTTGGGAAAAACTTACTGCAGATATTGCTGAGATTCATGAGAAATTGAAAACGCTTCAATCTTCAGTAAGATGTGAAGATGAAAAGAGTTCACGTAAGAGTTCCAAGGACATTTCCAAGAGAAATGCGTCCAGGGTTTCACCATACACAGACAAGGACTCGAGAATGTTAATGTCACAAGCTGTCTCATTCATAGATTTGTTAGTTGGAAATTATATGAGGCCCATTGAACGCATGCCTTTCAATGAAATTTTCTGCTTCAAGGATGTTGAGAAGCTTCAATCGGTTTTGATTGGAGATCCAAGAAGTAGGATTCAAGTTGATCTGTTGGAGTCCTATAAAATTTTAAGGTGCAGTTGCTGTAACAAGAGTGGCAATGCCATATTGCCATCCAAGCATGATTCCTCAATTATGTTATTCTCGTTCTCTGTTTTGATTTTTCTATTGATTTCTTATGCTAATAAAAGAATCTCTTCAGAAGAGCACGCCCTCAACTTGGAATATGAGGCAACCTCCCCTCCCCCTAAACTTTTGTATTCCCTGGCTCAAGAGCATGGGGATCTTATCAATCTTCATGACTGGTTCCAGTCTTTTAGAACAATTGTTCTTCAACCAACAACTAAAAGGAAACAAAAGACAAAGCAATCCTCTAATGGGTCTGGAGACCAAAGTGCAGCTTCAATTCAGGCAGTTACGGAGTTGCAGATCACAGGGCTAATTAGAATGCCCAGCAAGAGACGCCCAGATTTTGTTCAAAGGATAGCATTTGGACTTTGA 2394 0.4006 MAPSSPSVADTLSPSSTPVNSDNDLQPFFVLHKASSQRKDKASTRQGKVRKRNELSLSSPQSTKKLEGSTIEECDHHLFQQLKIEAFGNVWTKIESTIKDVLRDLNTSVFNDIQQWVLECFNATALIGELSVAEATCSFPALNNTNPGKLFTALVITRNIEFVDDILTFEELGHFLKSQGCHVAVLSSIEFSVKNGIAGCLKALLREFIAGAIDVRASELVYYKINFIYFCCLLYFFPFLNAVVNQSADISILASWYREQDHYNKPLVLIINDLERCCGSVLTDFILMLSEWVVKVPIMLIIGVTTTVDNTRNILPSQALERLCSSKFLLGTPAEKMDAIVEAVLVKQCTTFNIGHKVALFLRNYFINQDGTLTSFIKALKVACLLHFSMEPLSVIHGRLAEDQKEKCALSPETMLKYMDELPTVERNQMVDQTGKSMAQSLSEVLTVRKLWSTAVLCLHEAAKYSRVRLLDLFCEVLNPDLYLSRDSDCGVGDEKESGLSSTGDPCQQYSVMQSSTFICQIVRKVRDLPSGRLHQLIKTWEKLTADIAEIHEKLKTLQSSVRCEDEKSSRKSSKDISKRNASRVSPYTDKDSRMLMSQAVSFIDLLVGNYMRPIERMPFNEIFCFKDVEKLQSVLIGDPRSRIQVDLLESYKILRCSCCNKSGNAILPSKHDSSIMLFSFSVLIFLLISYANKRISSEEHALNLEYEATSPPPKLLYSLAQEHGDLINLHDWFQSFRTIVLQPTTKRKQKTKQSSNGSGDQSAASIQAVTELQITGLIRMPSKRRPDFVQRIAFGL 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0060 797 MobiDBLite consensus disorder prediction 1 24 - -
Lal1g0060 797 MobiDBLite consensus disorder prediction 1 67 - -
Lal1g0060 797 Pfam Origin recognition complex winged helix C-terminal 641 759 IPR040855 -
Lal1g0060 797 MobiDBLite consensus disorder prediction 566 586 - -
Lal1g0060 797 MobiDBLite consensus disorder prediction 745 765 - -
Lal1g0060 797 MobiDBLite consensus disorder prediction 53 67 - -
Lal1g0060 797 MobiDBLite consensus disorder prediction 34 52 - -
Lal1g0060 797 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 712 796 IPR020795 GO:0003677|GO:0005664|GO:0006260
Lal1g0060 797 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 14 677 IPR020795 GO:0003677|GO:0005664|GO:0006260
Lal1g0060 797 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 712 796 - -
Lal1g0060 797 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 14 677 - -
Lal1g0060 797 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 262 396 IPR045667 -
Lal1g0060 797 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 74 211 IPR045667 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0060 1 742 Core DNA Replication Machinery Family AT5G16690 41.036 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0060 K02605 - gmx:100780646 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0060 1 442821 451441 Lal1g0060 1 442821 451441 ECH