Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0046 ATGGCCAAGAAGAAAAGCTGGTTTGGTCTAGTGAAGAGGCTCTTTATATGGGACACACATTCAACACAGGATAAGGAGAAAAGAAGGAAATGGATGTTTGGAAGGGTAAAAACTAAGAGGTTACCTTCAATAACAGCACCACCATCAGAAGAGTTAAAAGAAACTACACTAAGTGAAGCAGAGGAAGAACAAAACAAGCATGCTTTAAAAGTGGCTATTGCTTCAGCTGCTGCTGCTGCTACTGCTACTGATGCTGAGGTTGTTAGGCTCACTAGAAGAAATGATGATCCTCAGTGCCAAAGGAAGATTCAAGAATCTGCAGCTATCAAAGTTCAAACTGCTTTTCGGGGTTACCTAGCAAGAAAGGCTTTGAGAGCATTGAAAGGAATAGTGAAGCTTCAAGCTATAATTCGCGGTAGAGCAGTAAGACGCCAAGCTATGAGTACTCTGAAGTGCTTGCAGTCCATTGTGAATATCCAAACAAAGGTTTGTGAAAGGAGACTCCAAATGGCTAAAGGAAGATGTGATTGTGATGAAAATGAAGAGATGCAAAACTCAAAAGACAAGATAATAAGAATGGACTCAAACAGTGAAAGAAAGTGGGATGACAGCACTTTATTGAAGGAAGAAGTCGAAGCCTATTGCATAATCAAGAAAGAAGCAACTCTTAAGAGAGAAAGAATAAGAGAATACTCATTTAACCACAGAAGATCAGCTGAGTCAGAAAGAAATAAAGTACATGGAAGATGGAGATATTGGCTGGAGCAATGGGTAGATACACAACTTTCCAAGAGTAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCTCACATTCTAAAGCTGGGGAGGAATATGGAGGAAAACAACTTAAGCTGAGAAATCTTCAAAGACAAAACACATTTGAGGGATTAGATTCTCCAACACTTGCACCAAGAAAAGCTTTTTCTCATTGGAGGCAGTGTTCAGTGGGAGAAGACCGCTCATATTCAAGTTCACCTGTAACTCCAGCATACATGGCTGCCACAGAATCAGCAAAAGCAAAATCAAGATCAACAAGCTCACCAAAAGTAAGGGCATGGAATTTGGACATGAACTCTGATACCTATTCACCTTGCAAGAAAAAGCTACCTATTAACATTGGTCATCAACAAAGATCTCCAAGCTTTAAGGGCCTTTCAATGCCTATAAAATCTAGCAACACTATAATAAAGGATCTTAGCATCAATTCAGATTGCTCACTCCCTTATTGGAATAACCAAAGTTCTTTCAAATGA 1275 0.3937 MAKKKSWFGLVKRLFIWDTHSTQDKEKRRKWMFGRVKTKRLPSITAPPSEELKETTLSEAEEEQNKHALKVAIASAAAAATATDAEVVRLTRRNDDPQCQRKIQESAAIKVQTAFRGYLARKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVNIQTKVCERRLQMAKGRCDCDENEEMQNSKDKIIRMDSNSERKWDDSTLLKEEVEAYCIIKKEATLKRERIREYSFNHRRSAESERNKVHGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHSKAGEEYGGKQLKLRNLQRQNTFEGLDSPTLAPRKAFSHWRQCSVGEDRSYSSSPVTPAYMAATESAKAKSRSTSSPKVRAWNLDMNSDTYSPCKKKLPINIGHQQRSPSFKGLSMPIKSSNTIIKDLSINSDCSLPYWNNQSSFK 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0046 424 Gene3D - 102 153 - -
Lal1g0046 424 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Lal1g0046 424 Pfam Protein of unknown function (DUF4005) 327 383 IPR025064 -
Lal1g0046 424 PANTHER IQ-DOMAIN 11 5 410 - -
Lal1g0046 424 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Lal1g0046 424 Pfam IQ calmodulin-binding motif 106 125 IPR000048 GO:0005515
Lal1g0046 424 PANTHER IQ-DOMAIN 5-RELATED 5 410 - -
Lal1g0046 424 SMART iq_5 103 125 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0046 Lal-Chr1 355799 358968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0046 1 424 IQD Protein Family AT5G13460 45.610 3.63e-112 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0046 - - lang:109325242 744.577