Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0042 ATGGGTTATGTCTACCTCTCTTGCAAAGCTGAATCCACCGTCTCAACCTCAAATTCTCTCTCTCAATCTTCAAAACAGAACAAAGAGAAAAACATCAACATCCAACACTTCCACTACAGTGACCTTGAAGCTGCAACCAATGGTTTCTCAGAACGAAACCTCCTTGGAAAAGGAAGCCATGGATATGTCTACAAAGCCCTTCTTAGTGGAAAACCTGTTGCAGTTAAAAGATCTTCTAGACATCATTCTGTTCTTCCACCAAGACCACACCCCAATTATTCAACTTCTCATTCAATCACAAATGAACTTGACAATGAGATCGAAATCTTGTCCAAAATTCAAAGCCCAAGATTGGTCAACTTAGTTGGTTTTACAAATGATTCAAAAGATAGACTCTTGGTGGTTGAGTTTATGAGCAATGGAACACTCTATGATGTTCTTCATTCATCATCAAATAAGACAACAATACCAAGTTGGAGTAGGAGAATTCGTTTTGCTTTGCAAACTTCTAAAGCTATTGATACCCTTCATTCTTCAACACCACCAGTGATTCATAGAGATATCAAATCAGCAAATGTTCTCATTGATCAAAACTACAATGCAAGGTTAGGTGATTTTGGTTTAGCTTTAAGGGGCCATGTTGATGATTATAGACTAAGATTTACTCCACCTGCTGGTACAATGGGATACCTTGATCCTTGTTATGTGACTCCTGATAATTTAAGTACTAAGAATGATGTGTTTAGTTTTGGTATTTTGTTGTTAGAGATTATAAGTGGAAGAAAAGCTATTGATGTTACTTACTCACCACCTTCTATTGTGGATTGGGCTATTCCTCTTATCAAAAGAGGGAAGCTTTTGTGTGTTTATGATCCTAGGATTCCACCACCCAAGGATCCTATTGTGAGAAAACAATTGGCAGTTATTGCAGCAAAGTGTGTTAGGTCTTGTAGGGAGAGAAGGCCTTCAATGAATGAGATTGTTAGTTGGCTTTGTGGTTTGTGTAAATTGGTGCCTCTTCATTCGTGGAACGGTTTTAATATTAATAATCCTTGTATGATGGTTGAATCTGTGGGAAACCCAATTGAAGCAGGCAATAATGTTGCACAAGCACAATGGACTTCAAGATTTGAAGGCATGGTAGAAGGAAATAACCTTGATGTTGTGGATGCAAAACTGTCTAAATCTGCGACGAGATATTCACGGAGAGTGTATTCTGATTTAGGGTTGAGTAATAACTTGATGGATCTTATGGCTGCCACTGAGGAGAATGAATTTGTGAGAGATGTTGATGGAGTGGAACATGGTTCTAAATCCGGCAAAAAAGTTTCTTCTAGCACAAGGTTTGGCAGTGGAAGATATTTCACAAAGGGTAGCACTAGACATCTTTATCGCCGTTGTGGTAGCGATAAGGACACATTTGTTTTGAGTAAAGGCCAAATTATTGATGAATCCGAGACTTCAAAACATGAGAATGGAGTTTCTGGTTTGAAGTTGAATTCTATAGAAGCTGAAGTAATAGTCTAA 1527 0.3818 MGYVYLSCKAESTVSTSNSLSQSSKQNKEKNINIQHFHYSDLEAATNGFSERNLLGKGSHGYVYKALLSGKPVAVKRSSRHHSVLPPRPHPNYSTSHSITNELDNEIEILSKIQSPRLVNLVGFTNDSKDRLLVVEFMSNGTLYDVLHSSSNKTTIPSWSRRIRFALQTSKAIDTLHSSTPPVIHRDIKSANVLIDQNYNARLGDFGLALRGHVDDYRLRFTPPAGTMGYLDPCYVTPDNLSTKNDVFSFGILLLEIISGRKAIDVTYSPPSIVDWAIPLIKRGKLLCVYDPRIPPPKDPIVRKQLAVIAAKCVRSCRERRPSMNEIVSWLCGLCKLVPLHSWNGFNINNPCMMVESVGNPIEAGNNVAQAQWTSRFEGMVEGNNLDVVDAKLSKSATRYSRRVYSDLGLSNNLMDLMAATEENEFVRDVDGVEHGSKSGKKVSSSTRFGSGRYFTKGSTRHLYRRCGSDKDTFVLSKGQIIDESETSKHENGVSGLKLNSIEAEVIV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0042 508 Gene3D Transferase(Phosphotransferase) domain 1 138 338 - -
Lal1g0042 508 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 5 468 - -
Lal1g0042 508 SMART serkin_6 49 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0042 508 ProSiteProfiles Protein kinase domain profile. 49 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0042 508 SUPERFAMILY Protein kinase-like (PK-like) 32 342 IPR011009 -
Lal1g0042 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Lal1g0042 508 ProSitePatterns Protein kinases ATP-binding region signature. 55 76 IPR017441 GO:0005524
Lal1g0042 508 Gene3D Phosphorylase Kinase; domain 1 19 137 - -
Lal1g0042 508 PANTHER OS01G0750732 PROTEIN 5 468 - -
Lal1g0042 508 Pfam Protein kinase domain 50 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0042 Lal-Chr1 322880 324406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0042 37 331 Receptor kinase-like Gene Family AT3G59420 43.478 6.04e-71 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lal1g0042 Pkinase 2.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0042 - - gmx:100819674 710.294