Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0028 ATGAATACATTTTCTCATGTTCCCCCCGGTTTTAGATTCCATCCCACGGATGAAGAGCTTGTTGATTATTATCTTAGGAGAAAAGTAACTTCAAGAAGGATTGACCTTGATATCATAAAAGATGTTGATCTCTACAAAATTGAGCCATGGGATCTTCAAGATCTATGCAGAATAGGAACAGAAGAGCAAAATGAATGGTACTTCTTTAGTCATAAAGATAAGAAGTATCCGACAGGAACACGCACAAACAGAGCAACAGTAGCAGGATTTTGGAAAGCAACTGGAAGAGACAAAGCCATATATTCAAAAGAGAAGCTTGTAGGGATGAGGAAAACTTTGGTCTTTTATAAAGGACGAGCTCCTAATGGACAAAAATCTGATTGGATAATGCATGAGTATCGCCTTGAAACTGATGAAAATAATGCTTCATCACAGGCAAAAGGATGGGTTGTGTGTAGAGTATTCAAGAAGAGAGTAACAACAACAAGCATGCGTAAAGTGAGTGACCATGATTCCCCTTGTTGGTACGATGACCAAGTTTGTTTCATGCAAGATTTTGACTCACCAACCCAAATTACCTCTAAACCTAATCACTTCCTCTACCATATCCCATATAGTAATAATAATAATAATAGCCCTTGCAAGAAAGAGCTAGATTTGCCATATCATTTGCCACGTGATCATTTTCTCCAGCTTCCACTTCTAGAGAGCCCAAAACTACTTCAATCTTCTTCCACTATAAGTTCCTCTAATCCTATGGCATCAACATTACTCATGCAAGAACAACAAGTTCAACAACAAAACTTTCATGCATCAATGTATTGCAACAATAACAACATCGAACAGGGGGGAGTTGATCAAGTCACTGATTGGCGCGTGCTTGACAAGTTTGTTGCTTCACAACTTAGCCATGATAATGCATCATCGTCCAGAGACAATAATAACAACTTTCATGGGATGGATATTAATAGCAATGTGCAGCAAATGGTGCATGAAAACAATGCCTCAACATCAAACTCCACTTCTCCAATTGATTTGTGGAAATAG 1047 0.383 MNTFSHVPPGFRFHPTDEELVDYYLRRKVTSRRIDLDIIKDVDLYKIEPWDLQDLCRIGTEEQNEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAIYSKEKLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENNASSQAKGWVVCRVFKKRVTTTSMRKVSDHDSPCWYDDQVCFMQDFDSPTQITSKPNHFLYHIPYSNNNNNSPCKKELDLPYHLPRDHFLQLPLLESPKLLQSSSTISSSNPMASTLLMQEQQVQQQNFHASMYCNNNNIEQGGVDQVTDWRVLDKFVASQLSHDNASSSRDNNNNFHGMDINSNVQQMVHENNASTSNSTSPIDLWK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0028 348 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Lal1g0028 348 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 334 - -
Lal1g0028 348 MobiDBLite consensus disorder prediction 302 321 - -
Lal1g0028 348 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 334 - -
Lal1g0028 348 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Lal1g0028 348 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Lal1g0028 348 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0028 Lal-Chr1 219621 223271 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0028 1 348 NAC Transcription Factor Family AT1G12260 53.457 1.13e-126 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal1g0028 NAM 3.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0028 - - gmx:100809525 480.33