Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0018 ATGCACATAGCATCTGCATCAAATTCAACATCAACCAATAATACCTACAAAAGGTTTATAAAAGTGAAGTGCAACTCAACCACTTACCCAAGTTATTGCTACAAGTTTCTGTCCCCTTATGCATCAACAATCAAAACAAACACTGTGACACTCACAAAAATCTCAGTCCATGTGGCTCTAAAAGCAGCCAAAAACGCATCTTCAACATTGAAAAGGCTATCAAAAGGCAAGGGGAGGTTAAGTGATGCAGAGAGAGAGTTAATTAGTGATTGCAAAGAAAATGTTGGTGACGCAGTGGATCTGCTTCAACAATCTGTTGATGGGTTGAAATATTTGAATGGTACGAGGACATATGAAGAGAGGTTTGAATGGGATACCATAAAGACATGGATGAGTGCTTCAATAACAGATGAGGGTACTTGCACTGATGAGTTTGATGAACTCAAAGTCAGGGCTTCAATTCAGAACATCATCAAACGTGTTCTTCTTCATGTTGCTTGCTTAAATAGCATTGCTCTTGCTCTAGTCAATTCACTTTCCTACTAA 546 0.3864 MHIASASNSTSTNNTYKRFIKVKCNSTTYPSYCYKFLSPYASTIKTNTVTLTKISVHVALKAAKNASSTLKRLSKGKGRLSDAERELISDCKENVGDAVDLLQQSVDGLKYLNGTRTYEERFEWDTIKTWMSASITDEGTCTDEFDELKVRASIQNIIKRVLLHVACLNSIALALVNSLSY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0018 181 Gene3D Invertase/pectin methylesterase inhibitor family protein 16 180 IPR035513 -
Lal1g0018 181 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 179 IPR006501 GO:0004857
Lal1g0018 181 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 179 - -
Lal1g0018 181 SMART PMEI_2 15 175 IPR006501 GO:0004857
Lal1g0018 181 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 19 179 IPR035513 -
Lal1g0018 181 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 4 179 - -
Lal1g0018 181 CDD PMEI-like_3 24 180 - -
Lal1g0018 181 Pfam Plant invertase/pectin methylesterase inhibitor 19 174 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0018 Lal-Chr1 188537 189082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0018 20 180 Carbohydrate Esterase AT3G14310 24.845 4.08e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0018 - - gmx:100776299 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0018 1 188537 189082 Lal1g0018 1 188537 189082 ECH