Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0015 ATGTCCAATCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCAGGCATCAAAACCTCATTCCGATCCCTATCCCTATCCCTATCCCTATCCCTATCCCTATCCCATTGGAGAAAGGGAGATGGAAGGAGAAGGAATTGATTCATCATCATCTTCATCATCAATATTGTTAGCCTCTTCATTGGGTTTGAATCACATTCGCACACGCTTCTCATCTCCTCTTCGTTATTCTTCCTCTCTCGTTCCTCATTCCTTCGTTGTTCAACCTCAACCTCACATACCTAGATCCAAACCTCCACCTGAAAAACTTCATTGGACTCAATCCAAATCATTCAAACCTCATTCTCAAATTCTCCCCGTTCTAGAGGGTAATCATGCAGCTTTTGCCAAAGAAATGCAATCCCCACGTTTTCAAGCAATCCTCAGACTTACAAGTGGCCGTAAAAAGAGACACAATGATATTAAAAGCTTTTCCCATGAACTCAACTCTAAAGGTGTTAGACCTTTTCCAATCTGGAAACACCGTGCTTTCGGCCACATGGAGGAAGTCAGGGCCGCGGTTAGAGCTAAGTTTGAAAAATTAAAGGAAGAAGTTGATTCTGACTTGGGTTCCTTTGCTGGAGACTTGGTGGGTATTCTTGAAAAAATCTCAGGAACTCATCCTGAATCGAAAGAGAGTTTGGAGGATCTGTTGGTTGTTGCTCGACAATGTGCAAAGATGTCTCCTACTGAGTTTTGGATCAAATGTGAAACTATTGTTCAAAACCTAGATGACAAGCGTCAAGAGTTACCAGTTGGGATCCTCAAGCAAGCCCATACACGCCTCCTATTTATTCTCACTCGCTGCACTCGCTTAGTGCAATTCCAAAAGGAAAGTGGCTATGAACAAGATCATATTCTAGGCCTTCACCAACTCAGTGATCTTGGAGTATATTCAGAGCAAAATTTTCATGCTGCTTCACAACAGACATCAAGTGTTCCACTACCTGGTCGACATGACCAGATGGTTGAGAAGCAGTCACAAAAGGCACATAGCAATGAGAAAGACAAATTGGTAATGAAAAAAACTCAAGTTGATCAACTTGTAAGCGAGGCAAATGACAATGGGCTAAGTTCAGCAAAAAGTAATGAATCGACTCCAAGCAGTTATAGGATGTCTTCTTGGAGAAAGCTTCCATCTGCCGCTGAGAAAAAACGCAAAGATAAAGATGCCGTAGAACTCCCACCCAAAGGTGAACTGGATCAGTTGATAGTTAAAGATGGAAATGCTGAAAACTTGGACGATTTGTCATGTCATCCGGAACATTCAGAACCATCATCAAGAACGCGAAAGGTTTCTTGGGGATTCTGGGGGGATCAACAGAATCTAACATATGAAGATTCAATGATCTGCAGAATTTGTGAGGTTGAAATACCAATTGTACATGTAGAGGAACATTCTCGAATATGCACAATTGCTGATAGATGTGATTTGAAAGGCTTAACTGTAAGTGATCGGCTTGAAAGAGTTTCTGATACTATTGAAAGGATACTGGAATCCTGGACACCAAAAAGCGCTGATGCTCCAGGAGAAAGTTTTGAGGGAACCAGAGTGTCTACATCAAGTCTGCACGAAGAGTTGAATGAGCTATCTCTAGAAAGAAATAACTTGTCTTGGAGAGGCTCTGATGAAATGATTGACTCTACTCTTGATGCTGACAATACTTTTGTTATGGATGATCTTAACCTTTCATCTGAATGTGAAGCACGTACCTCCTTGAAACCTGATTATAGCACAAAGGTATCTTCAGCTGGAAGCTTGACACCAAGATCACCATTAGTAACACCACGGACCAGTCAGATAGAAATGTTATTAAGTGGACGAAGAACACTGTCCGAACTTGAGAGTTATGACCAGATACACAAGCTGGTGGAAATTGCTCGTGCTGTGGCAAATGTGAACAACTGTGACTACAGTGCTTTGGAGTATATGCTTGATCGCTTAGAAGACTTGAAATATGCAATTCAAGACAGAAAAGTGGATGCACTTATTGTGGAAACTTTTGGACGACGTATAGAGAAACTTTTGCAGGAGAAATATGTATCTTTTTGTGGGCAGATAGAAGATGAAAAGGTAGACTCGTCAAATAGCGCAGCTGATGAAGAGAGTTCAGTTGAAGAGGATACTGTCCGTAGCCTTCGTGCTAGCCCAATTAATCCTTGTTCTAAGGACCGAACCTCTATTGAAGACTTTGAAATAATAAAACCAATAAGCAGGGGCGCATTTGGAAGAGTTTTTCTGGCCCGAAAAAGAGCAACTGGTGATTTATTTGCTATAAAGGTTCTTAAAAAGGCAGATATGATCCGTAAAAATGCAGTCCAAAGTATTTTGGCTGAGCGAGACATCCTAATATCTGTTCAAAACCCTTTTGTGGTCCGTTTTTTCTACTCTTTCACATGTAGGGAAAATCTTTATCTGGTTATGGAGTATTTAAATGGTGGAGATCTGTATTCTCTGTTAAGAAATCTAGGTTGCCTAGATGAAGATATGGCTCGCGTATATATTGCAGAAGTTGTTCTTGCATTGGAGTATTTGCACTCCTCAAATGTGATTCACAGAGACTTGAAGCCAGATAACTTGTTGATTGGTCAAGATGGTCACATCAAGTTGACAGATTTTGGGCTCTCTAAGGTTGGTCTTATCAACAGCACAGATGATTTATCAGCACCATCATTTTCCACCAACGGGTTCCTAGGAGATGATGAACCAAAATCTCGACATTCTTCAAAATGGGAAGAACGTCGAAAGCACTCAGTAGTTGGCACCCCAGATTATTTGGCACCTGAGATACTCCTTGGCATGGGACATGGTGCAACTGCAGATTGGTGGTCTGTGGGTGTTATACTTTATGAGCTTCTTGTGGGCATTCCACCATTTAATGCAGAACATCCACAGCAAATTTTTGATAACATAATTAATAGAGACATACAATGGCCCAAGGTACCCGGGGAGATCAGCTTTGAAGCATATGATTTGATGAATAAATTATTGATTGAAAGTCCAGTCCAAAGGTTGGGTGCAACAGGAGCAGTTGAGGTCAAACGCCATGCTTTCTTCAAGGACATTAATTGGGATACTCTAGCAAGGCAGAAGGCTATGTTCATACCATCAACTGAAGCTCTTGATACAAGTTATTTCATGAGCCGGTACATTTGGAATCCAGAGGATGAACATCTTGCTGGGGGTAGTGATTTTGATGACATTACAGAAAGCACCAGTGGTTCAGGAAGTGATTTATTAGATGAAGATGGCGATGAATGTGGCAGTTTAGCTGATTTCAGTGCTCCAGCTCTTGAGGTCCAGTACTCATTTAGTAATTTCTCATTTAAGAACTTGTCTCAGCTAGCATCTATCAACTATGATCTGGTGATTAAGAACTCTAAGGACTCACCAGATAACTCCAACTCCAACCCCAACCCCAACCCGTCTGATACATGA 3477 0.4156 MSNPPPPPPPPPPPQASKPHSDPYPYPYPYPYPYPIGEREMEGEGIDSSSSSSSILLASSLGLNHIRTRFSSPLRYSSSLVPHSFVVQPQPHIPRSKPPPEKLHWTQSKSFKPHSQILPVLEGNHAAFAKEMQSPRFQAILRLTSGRKKRHNDIKSFSHELNSKGVRPFPIWKHRAFGHMEEVRAAVRAKFEKLKEEVDSDLGSFAGDLVGILEKISGTHPESKESLEDLLVVARQCAKMSPTEFWIKCETIVQNLDDKRQELPVGILKQAHTRLLFILTRCTRLVQFQKESGYEQDHILGLHQLSDLGVYSEQNFHAASQQTSSVPLPGRHDQMVEKQSQKAHSNEKDKLVMKKTQVDQLVSEANDNGLSSAKSNESTPSSYRMSSWRKLPSAAEKKRKDKDAVELPPKGELDQLIVKDGNAENLDDLSCHPEHSEPSSRTRKVSWGFWGDQQNLTYEDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVSDRLERVSDTIERILESWTPKSADAPGESFEGTRVSTSSLHEELNELSLERNNLSWRGSDEMIDSTLDADNTFVMDDLNLSSECEARTSLKPDYSTKVSSAGSLTPRSPLVTPRTSQIEMLLSGRRTLSELESYDQIHKLVEIARAVANVNNCDYSALEYMLDRLEDLKYAIQDRKVDALIVETFGRRIEKLLQEKYVSFCGQIEDEKVDSSNSAADEESSVEEDTVRSLRASPINPCSKDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVQNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAEVVLALEYLHSSNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPSFSTNGFLGDDEPKSRHSSKWEERRKHSVVGTPDYLAPEILLGMGHGATADWWSVGVILYELLVGIPPFNAEHPQQIFDNIINRDIQWPKVPGEISFEAYDLMNKLLIESPVQRLGATGAVEVKRHAFFKDINWDTLARQKAMFIPSTEALDTSYFMSRYIWNPEDEHLAGGSDFDDITESTSGSGSDLLDEDGDECGSLADFSAPALEVQYSFSNFSFKNLSQLASINYDLVIKNSKDSPDNSNSNPNPNPSDT 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0015 1158 ProSitePatterns Serine/Threonine protein kinases active-site signature. 863 875 IPR008271 GO:0004672|GO:0006468
Lal1g0015 1158 MobiDBLite consensus disorder prediction 907 926 - -
Lal1g0015 1158 ProSiteProfiles AGC-kinase C-terminal domain profile. 1033 1132 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal1g0015 1158 CDD STKc_MAST_like 750 1037 - -
Lal1g0015 1158 SUPERFAMILY Protein kinase-like (PK-like) 728 1056 IPR011009 -
Lal1g0015 1158 MobiDBLite consensus disorder prediction 319 352 - -
Lal1g0015 1158 MobiDBLite consensus disorder prediction 1074 1094 - -
Lal1g0015 1158 MobiDBLite consensus disorder prediction 364 417 - -
Lal1g0015 1158 MobiDBLite consensus disorder prediction 1139 1158 - -
Lal1g0015 1158 SUPERFAMILY Formin homology 2 domain (FH2 domain) 4 110 - -
Lal1g0015 1158 MobiDBLite consensus disorder prediction 1 26 - -
Lal1g0015 1158 Gene3D Transferase(Phosphotransferase) domain 1 828 1050 - -
Lal1g0015 1158 MobiDBLite consensus disorder prediction 335 352 - -
Lal1g0015 1158 Gene3D Phosphorylase Kinase; domain 1 742 1059 - -
Lal1g0015 1158 ProSiteProfiles Protein kinase domain profile. 744 1032 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0015 1158 PANTHER SERINE/THREONINE-PROTEIN KINASE 44 1149 - -
Lal1g0015 1158 Pfam Protein kinase domain 744 1031 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0015 1158 MobiDBLite consensus disorder prediction 391 409 - -
Lal1g0015 1158 SMART serkin_6 744 1032 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0015 1158 MobiDBLite consensus disorder prediction 364 388 - -
Lal1g0015 1158 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 44 1149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0015 Lal-Chr1 173395 180641 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0015 40 1153 AGC Kinase Gene Family AT5G62310 64.773 0.0 1437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Lal1g0015 Pkinase 1.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0015 - - gmx:100806311 1717.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0015 1 173395 180641 Lal1g0015 1 173395 180641 ECH