Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0014 ATGGCTTCTTCTAATGGTGGTGTGCCTCCAGGGTTTAGATTTCATCCCACGGATGAAGAGCTGCTTCATTACTACTTGAAGAAGAAAGTCTCCTTTCAAAAGTTTGACATGGATGTTATTAGAGAGGTCGACTTGAACAAGATGGAACCTTGGGACTTGCAAGAAAGATGTAAAATTGGGTCAACTCCACAAAATGAGTGGTATTTCTTTAGTCACAAGGATAAAAAGTACCCAACGGGGTCAAGGACAAATAGAGCAACGAATGCAGGATTCTGGAAAGCAACAGGAAGAGACAAATGCATTAGGAATACATACAAAAAGATTGGAATGAGGAAAACGCTTGTGTTCTATAAAGGTAGAGCTCCTCATGGACAAAAGAGTGATTGGATCATGCATGAGTACCGCCTCGAAGATAGCAATGACCCTCAATCAAATAACAATGAAGAGGGATGGGTGGTGTGCAGGGTGTTCAAGAAGAAGAACCTATTTAAGGTCGGAAATGAAGGTGCTTCCACACAACAACTCAACAATAATAACTACTCTTCATCAGACACCAATGCTCGCTCCTCCATGCTTCGAGATAACCACTACTTACTACATCAACAAAACCTTAGAAACCCCTCAGACTTAGGTTCTGAGCTTCATAAACCGGAACTAGGGTTGCATTATCCCCACTTGCAGCAAAACCCTCATTACCCGCTCTTCCAATCCCAACAATCTCTTCTTCAGACACACAAACCCATGGCTTATGACTACTCATCATATGCATCAGGATCAGGCATGTACCAAGTTTCGGAGGGTGGCATGGAAGTGGGGTCATGCGAGGGTGAAGAAATGGGTGGAGGAAGATCAGGTGAAGGAATGAATGAATGGGGTGTTCTTGATAGGCTTGTGACCTCTCATCTTGGTGCTAATGCTAATGCTAATGAAGACTCAAGCAAAGGGGTGAGGTTTGAAGATGCACCAAATCCACACCACCACCTCTCATTGCGTGGAGAGATAATGGACTTTTGGGGCTATTCTAAACAATGA 1032 0.4351 MASSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCKIGSTPQNEWYFFSHKDKKYPTGSRTNRATNAGFWKATGRDKCIRNTYKKIGMRKTLVFYKGRAPHGQKSDWIMHEYRLEDSNDPQSNNNEEGWVVCRVFKKKNLFKVGNEGASTQQLNNNNYSSSDTNARSSMLRDNHYLLHQQNLRNPSDLGSELHKPELGLHYPHLQQNPHYPLFQSQQSLLQTHKPMAYDYSSYASGSGMYQVSEGGMEVGSCEGEEMGGGRSGEGMNEWGVLDRLVTSHLGANANANEDSSKGVRFEDAPNPHHHLSLRGEIMDFWGYSKQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0014 343 MobiDBLite consensus disorder prediction 168 188 - -
Lal1g0014 343 PANTHER PROTEIN BEARSKIN2-LIKE 5 197 IPR033519 -
Lal1g0014 343 Gene3D NAC domain 17 164 IPR036093 GO:0003677|GO:0006355
Lal1g0014 343 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Lal1g0014 343 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Lal1g0014 343 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 197 - -
Lal1g0014 343 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0014 Lal-Chr1 170529 172924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0014 1 333 NAC Transcription Factor Family AT1G33280 57.061 3.97e-124 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal1g0014 NAM 1.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0014 - - gmx:100804181 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0014 1 170529 172924 Lal9g0014 9 85944 89772 LSH