Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1540 ATGGAGTTTGTCTTTTATAGAGACATAGTCATGCATGCCATGGAAATCCAACCAGCTGCTTCAAGCTTCTTCCTGGTGTTAGTAATTTTGATGTATTATTGTGTTGGAAAGATTTATAAGCAGAAAAGCAAAGTGGTTGAAAAACTGCCCCCAGGGCCATGGAAGCTGCCTATAATAGGGAACCTACACCAACTAGCATGGGAAAGCTCACTTCCACACCGTGCTCTTCGAGATCTAGCCAACAAATATGGACCTCTTATGCACTTTCAGTTGGGTGAAATTTCAGCTCTCGTTGTATCATCCCCTCATATGGCCAAACAGATTCTCAAGACACATGATATTGCTTTTCTTCAGAGACCTCAAACTCTTGCATCTCAAATTTTATTCTACGGTTCAACTAACATTGCCCTTGCTCCATACACTGATTACTGGAGACAGATGCGAAAAATATGCATCTTAGAGCTTCTAAGTGCTAAGAGGGTTCAGTCCTTCGCCTTCACTAGAGAAAATGAGGTTGCTAAACTCATACACTTCATCCACTTCTCTCAAGGTTCACCACTCAATCTTACTAAAGCAGTTTCCTCTCTCACAAATACCATCATTTCAAGGGTAGCATTTGGTCAAAAATCTAAGCATGAGGATGAAGTTTTATTTTTAATTAAGAAAATACCTCAACTGTTGGGAGGTTTTGACTTGGCTGATTTGTTCCCTTCTTTGAAACCTCTTCATCTCATTACTGGGTTGAAAACTAAATTGGAGAATGTTCATAAGAAGCTGGATAAGGTCTTAGATAATATTGTCCACGAGCATCAACTAAGGATGAGATCATCAAACCATGAAGCAAGGAATGAAAGAGAAAAAGAAGACCTTGTTGATGTTCTTTTGAGAGTGCAACAGAATGGCACCCTCCAGATCCCTCTCACACTCAAAAATATCAAAGCCGTCATATTGGATATATTCGCTGCTGGGACTGATACTTCAGCTATAGTGATAGAATGGGCAGTGTCAGAGTTAATGAAAAACCCAAGAGTGAGAGAGAAAGTTCAGGCTGAAATAAGAGAAGCTTTTAAAGGAAAGAAAACATTTTATGAGAGTGACCTAGATGAACTTAGGTACTTAAAGTCAGTGATCAAAGAAACCATGAGATTACACCCACCTGCTCCTTTGTTGCTTCCAAGAGAATGCAGGGAACCATGCAAGATAGGTGAATATGAAATACCTATCAAAACTAGAGTGATGGTAAATGTATGGGCACTTGGAAGAGATTCCAATCATTGGTATGATGCCAATAGCTTTATTCCAGAGAGGTTTGATGACACTAATATTGATTTTAAAGGGAACAACTTTGAGTTCATCCCTTTTGGATCAGGAAGGAGAATATGTCCAGGTATTTCACTTGCTTTAGCTACTGTTCAGCTTATTCTGGCTGCACTACTTTATCACTTCGACTGGGAACTCCCTAATGGAATGAAGCCAGAAGACTTAGATATGACTGAAGTCTTTGGAGCAGGGCTGGTGAAGAAGAACAACTTGTGTTTGATTCCTACTTGGTATGATGCTCCCCTTCAAGATAATGTTACTGCCAATTGA 1590 0.3975 MEFVFYRDIVMHAMEIQPAASSFFLVLVILMYYCVGKIYKQKSKVVEKLPPGPWKLPIIGNLHQLAWESSLPHRALRDLANKYGPLMHFQLGEISALVVSSPHMAKQILKTHDIAFLQRPQTLASQILFYGSTNIALAPYTDYWRQMRKICILELLSAKRVQSFAFTRENEVAKLIHFIHFSQGSPLNLTKAVSSLTNTIISRVAFGQKSKHEDEVLFLIKKIPQLLGGFDLADLFPSLKPLHLITGLKTKLENVHKKLDKVLDNIVHEHQLRMRSSNHEARNEREKEDLVDVLLRVQQNGTLQIPLTLKNIKAVILDIFAAGTDTSAIVIEWAVSELMKNPRVREKVQAEIREAFKGKKTFYESDLDELRYLKSVIKETMRLHPPAPLLLPRECREPCKIGEYEIPIKTRVMVNVWALGRDSNHWYDANSFIPERFDDTNIDFKGNNFEFIPFGSGRRICPGISLALATVQLILAALLYHFDWELPNGMKPEDLDMTEVFGAGLVKKNNLCLIPTWYDAPLQDNVTAN 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1540 529 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Lal19g1540 529 Gene3D Cytochrome P450 42 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 PANTHER CYTOCHROME P450 71D8 20 520 - -
Lal19g1540 529 PANTHER OS08G0105600 PROTEIN 20 520 - -
Lal19g1540 529 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 SUPERFAMILY Cytochrome P450 50 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal19g1540 529 Pfam Cytochrome P450 50 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1540 Lal-Chr19 17631362 17636323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1540 22 516 Cytochrome P450 AT5G25120 43.366 1.78e-139 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1540 - K23806 lang:109352779 914.835