Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1526 ATGTACGGTGTATTTGATTATTGTATTCCGAGGAATGTGATTGATTGTATGACAAGTATTTATTTGTTCTGTGGCAGAAAAAAGAGAAGGAGAATGGCTACTTCATCAGCTATTGAGAATTTTGATGAATCTATGAAGAAACAGATAACATCGCTTTTGCGGGTTATGAATTTAGTTAAATACTGCAAACAGGATAGTACTCCTTGCAAAATTGACGAGGGTCTCTTTTTGGGTTCACTTGGCGCTTCAAATAACAAGGATGCATTGAAAGACTTGAATGTTACTCACATTTTGACTGTGGCTGGTACATTGGCACCTGCACACCCTGAGGATTTTGTCTATAAAATTATACAGGTTGCCGACAGAGACGATGTCAACATAAAACAGTACTTCGATGAATGTTTTACTTTTATAGATGACTCTAAAAGGTGTGGCGAAGGTGTTTTAGTTCATTGTTATGCTGGAAAATCAAGGAGTGTGACTATTGTTGTGGCATATCTGATGAAGACTCGTGGAATGAGCTTATCTGAAGCTCTGCAACATGTAAAAGGCAAACGAGCAGTAGCAGCTCCCAATCCTGGTTTCATTCGGCAGCTGCAGGACTTTGAAAAATCTCTTCAAGGTGCCTCTTCATTGTATTAG 642 0.3879 MYGVFDYCIPRNVIDCMTSIYLFCGRKKRRRMATSSAIENFDESMKKQITSLLRVMNLVKYCKQDSTPCKIDEGLFLGSLGASNNKDALKDLNVTHILTVAGTLAPAHPEDFVYKIIQVADRDDVNIKQYFDECFTFIDDSKRCGEGVLVHCYAGKSRSVTIVVAYLMKTRGMSLSEALQHVKGKRAVAAPNPGFIRQLQDFEKSLQGASSLY 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1526 213 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 29 209 - -
Lal19g1526 213 Pfam Dual specificity phosphatase, catalytic domain 75 204 IPR000340 GO:0008138|GO:0016311
Lal19g1526 213 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 186 IPR000387 GO:0016311|GO:0016791
Lal19g1526 213 SMART dsp_5 67 205 IPR020422 GO:0006470|GO:0008138
Lal19g1526 213 PANTHER BNAA01G23680D PROTEIN 29 209 - -
Lal19g1526 213 Gene3D Protein tyrosine phosphatase superfamily 59 211 IPR029021 -
Lal19g1526 213 ProSiteProfiles Dual specificity protein phosphatase domain profile. 67 208 IPR020422 GO:0006470|GO:0008138
Lal19g1526 213 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 66 210 IPR029021 -
Lal19g1526 213 CDD DSP 68 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1526 Lal-Chr19 17558671 17561825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1526 69 208 Protein tyrosine phosphatase (PTP) family AT3G06110 59.286 3.14e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1526 - - lang:109352945 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1526 19 17558671 17561825 Lal19g1526 19 17558671 17561825 ECH