Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1524 ATGAATATTAGTATAACATTATCATCAGCTGCGTGCAAGCCCATAGTGAATTTCCAACCGGCACTCACCTCTTTGTTGAATCAGCATCAACAACAACGTAAGGACAAGGTGGTAGTTATCATGGGAGCCACCGGTTCCGGCAAGTCAAAGTTGGCCATAGATCTAGCCACCCATTTCCCACCGGCAGAGATAGTTAACTCTGACAAAATGCAAGTTTATAAAGGTCTTGATATCACCACTAACAAGGTCACTGAGGAAGAGTCTCGTGGTGTTCCACACCATCTCTTAAGCATTGTTGATGATCCTAACTATAATTTCACTGCCAATGATTTTTGCCACCATGCCTCTCTCGCCATTGATTCCATTGTAGGCAGAGATGGTTTGCCCATCATTGCTGGTGGCTCCAATTCCTTCATTGAAGCTTTGGTCAACCACGATTCCACATTTCGAGCAAGGTATGAGTGTTGTTTCCTTTGGGTGGATGTATCACTCCCAGTTCTCCATTCATCGCTCTCAGCAAGAGTGGATCGGATGATAGAAGCTGGACAACTCGATGAAGTTCGTCAATTTTTTGAACATTCTATTTATGATTACACAAGAGGGGTTCGAAGGGCAATAGGGTTACCTGAATTTGATGAATTTTTAAGAGAAGAACATTCCACATATGCTGATCAAATAAAAAAGAAGAAGCTTCTGGAAGCTGCCATTGCTATGACAAAAGTGAATAATTGCAAGCTCGCAAGTCGCCAAGTGCAAAAGATCAATCGCCTTTACACAATTTGGAAAAACAACACGTATAGGCTAAATGCCACTCAGTCTGTATTCAACAAAAGCGCATGGGATGATGACGTGGCGGCAAAGGGTTGTAGGATTTTGCAAAAGTTTCTGTACGATGATACTTGTGTTTTAGTTCCTGCCGGTGGGCCGCTGCTACCATCGCTTCCGTCAGCTATGACCGCGGTAACTCATTAG 972 0.4342 MNISITLSSAACKPIVNFQPALTSLLNQHQQQRKDKVVVIMGATGSGKSKLAIDLATHFPPAEIVNSDKMQVYKGLDITTNKVTEEESRGVPHHLLSIVDDPNYNFTANDFCHHASLAIDSIVGRDGLPIIAGGSNSFIEALVNHDSTFRARYECCFLWVDVSLPVLHSSLSARVDRMIEAGQLDEVRQFFEHSIYDYTRGVRRAIGLPEFDEFLREEHSTYADQIKKKKLLEAAIAMTKVNNCKLASRQVQKINRLYTIWKNNTYRLNATQSVFNKSAWDDDVAAKGCRILQKFLYDDTCVLVPAGGPLLPSLPSAMTAVTH 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1524 323 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 164 265 - -
Lal19g1524 323 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 26 300 - -
Lal19g1524 323 ProSiteProfiles Guanylate kinase-like domain profile. 35 124 IPR008144 -
Lal19g1524 323 Pfam IPP transferase 150 252 - -
Lal19g1524 323 Pfam IPP transferase 71 144 - -
Lal19g1524 323 Gene3D - 34 296 IPR027417 -
Lal19g1524 323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 199 IPR027417 -
Lal19g1524 323 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 26 300 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1524 Lal-Chr19 17536270 17539934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1524 151 300 C2H2 Transcription Factor Family AT2G27760 30.508 1.40e-15 75.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1524 19 17536270 17539934 Lal19g1524 19 17536270 17539934 ECH
Lal14g1971 14 18769809 18771950 Lal19g1524 19 17536270 17539934 LSH
Lal19g1524 19 17536270 17539934 Lal11g0462 11 3563215 3565763 PCT
Lal11g0462 11 3563215 3565763 Lal19g1524 19 17536270 17539934 PCT