Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1510 ATGGCTTTATTTGATAAGTTTATGACAGTGATGACCTCTGATCATGCTTCAGTTGTTTCCATGAACCTATTTGTTGCTCTTCTTTGCACTTGCATTATTCTTGGTCATTTGCTTGAGGAGAATCGATGGATTAATGAATCCATCACTGCACTTCTCATTGGTCTTTGTACAGGTGTTTTTATATTGTTTACAACTGGAGGAAAAAGCTCCCATATATTAGTTTTCAGCCAAGATCTTTTCTTTATTTACCTTCTTCCTCCCATCATTTTCAATGCAGGGTTTCAGGTCAAGAAGAAACAATTTTTCCGTAATTTTATGACTATCATGCTCTTTGGTGTAGTTGGTACTTTGATTTCATTCTGCATCATATCACTAGGTGCTATACACTTTTTCCAGAAATTGGATATTGGTTCCCTGAAGATAGGAGATTATCTAGCAATTGGAGCAATATTTTCAGCAACAGATTCTGTTTGCACCTTGCAGGTGCTTAATCAAGATGAGACACCTTTACTATACAGCTTGGTCTTTGGAGAGGGGGTAGTAAATGATGCTACATCTGTAGTGCTCTTCAAAGCAATTCAGAATTTTGATCTCTCCAACATTGACTCCACCACTGCTTTACACTTAATAGGAAATTTTTTATATTTATTCATCGCAAGTACTGTACTAGGAATCTTTGCTGGATTGCTGAGTGCTTATATTATTAAACAGCTCTATTTTGGAAAGTTGATAAGGCATTCTACGGATCGTGAGGTTGCTCTTATGATACTAATGGCTTACCTTTCATATATGCTAGCTGAACTATTTTCTTTAAGTGCCATTCTGACTGTGTTCTTCTGTGGCATTGTAATGTCTCACTATACATGGCATAATGTGACAGAAAGTTCAAGAGTGACAACCAAGCATGCTTTTGCCACTCTATCATTCATTGCTGAGATCTTTATCTTCCTTTATGTTGGGATGGATGCACTTGACATAGAGAAGTGGCGATTAGTAAGTCAAAGCCCAAAAAAATCAATTGGGGTGAGTTCTATGCTGTTGGCACTTATCCTAGTGGGAAGAGCAGCCTTTGTTTTTCCTCTGTCCTTCTTATCCAACTTGCATAAGAAGTCTCAAAGTGAGAAAATTGAGTTCAAGCAACAAGTAACAATTTGGTGGGCTGGTCTGATGCGTGGAGCTGTTTCTATTGCGCTTGCCTACAATCAGTTTACAAGGCTAGGCCATACTAAATTGAGTGAGAATGCCATCATAATCACTAGTACTATCACTGTTGTACTCTTCAGCACATTGGTGTTTGGGGTGATGACAAAACCACTTGTGAGGTTATTGCTTCCCTCCTCTAAACACATAATCAGCATACCTTCCCCACCATCCACCCCAAAATCATTCACTGTGCCACTTCTTGGCAATGGACATGATTCAGAGGCCAATATTGGTGGCACCCACCGTGTGCCTAGCAGCTTCCGCATGCTCTTAAGGCTTCCCTCTAGTGGGGTACACCACTACTGGCGCAAATTTGATAATTCTTTCATGCGACCTGTCTTTGGTGGACGCGGTTTTGTACCTTATGTTCCTGGTTCACCTCTTGAACCAAGTGTGCATCAGTGGCATTAA 1614 0.4002 MALFDKFMTVMTSDHASVVSMNLFVALLCTCIILGHLLEENRWINESITALLIGLCTGVFILFTTGGKSSHILVFSQDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGVVGTLISFCIISLGAIHFFQKLDIGSLKIGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQNFDLSNIDSTTALHLIGNFLYLFIASTVLGIFAGLLSAYIIKQLYFGKLIRHSTDREVALMILMAYLSYMLAELFSLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFIAEIFIFLYVGMDALDIEKWRLVSQSPKKSIGVSSMLLALILVGRAAFVFPLSFLSNLHKKSQSEKIEFKQQVTIWWAGLMRGAVSIALAYNQFTRLGHTKLSENAIIITSTITVVLFSTLVFGVMTKPLVRLLLPSSKHIISIPSPPSTPKSFTVPLLGNGHDSEANIGGTHRVPSSFRMLLRLPSSGVHHYWRKFDNSFMRPVFGGRGFVPYVPGSPLEPSVHQWH 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1510 537 PRINTS Na+/H+ exchanger signature 79 90 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal19g1510 537 PRINTS Na+/H+ exchanger signature 93 107 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal19g1510 537 PRINTS Na+/H+ exchanger signature 108 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal19g1510 537 PRINTS Na+/H+ exchanger signature 148 158 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal19g1510 537 PANTHER SODIUM/HYDROGEN EXCHANGER 3 5 537 - -
Lal19g1510 537 PANTHER SODIUM/HYDROGEN EXCHANGER 5 537 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lal19g1510 537 Pfam Sodium/hydrogen exchanger family 25 441 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal19g1510 537 Gene3D - 140 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1510 Lal-Chr19 17437030 17443570 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1510 2 535 Antiporters AT3G05030 72.222 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1510 - - ccaj:109808409 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1510 19 17437030 17443570 Lal19g1510 19 17437030 17443570 ECH