Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1493 ATGGTTGTAGGGAAGATTTCTTTTATCGATCTTGCTGGGAGTGAAAGAGGTGCTGACACTACCGACAATGACCGTCAGACAAGGATCGAGGGAGCAGAAATTAATAAGAGCCTTTTGGCTTTGAAGGAGTGCATTCGTGCTTTGGACAATGACCAGATCCATATTCCATTCCGTGGAAGCAAACTTACAGAAGTGCTCCGTGACTCCTTTGTTGGCAATTCAAAGACTGTTATGATCTCTTGTATATCTCCAAATGCTGGATCTTGTGAACATACACTCAATACCTTGAGATATGCAGATCGCGTTAAAAGTTTATCCAAAAGTGGAAACCCTAAAAAGGATCAGGCGCCAAATCCAGTAATGCAAACAAATAAGGAGGTTTTATCCACATCATCCATTCCATCTAGTGCTGGTGCAGAGGATTTTAGTGATCAACGCCATGAGGTGAAAACGGGGGATATGGACCGGAAAGTTGTTGAAAAGCAAAATTACAGCTCTGCTGCTGAAGTTGACAAACAGCCTTCCAGTTTTTTTTCAAGTTATCTCTTCAATGGATGA 558 0.4194 MVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNPKKDQAPNPVMQTNKEVLSTSSIPSSAGAEDFSDQRHEVKTGDMDRKVVEKQNYSSAAEVDKQPSSFFSSYLFNG 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1493 185 PRINTS Kinesin heavy chain signature 5 23 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal19g1493 185 PRINTS Kinesin heavy chain signature 55 76 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal19g1493 185 SMART kinesin_4 2 111 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal19g1493 185 PANTHER KINESIN-LIKE PROTEIN 2 185 - -
Lal19g1493 185 Pfam Kinesin motor domain 3 104 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal19g1493 185 ProSiteProfiles Kinesin motor domain profile. 1 105 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal19g1493 185 Gene3D Kinesin motor domain 1 104 IPR036961 -
Lal19g1493 185 MobiDBLite consensus disorder prediction 129 157 - -
Lal19g1493 185 ProSitePatterns Kinesin motor domain signature. 4 15 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal19g1493 185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 108 IPR027417 -
Lal19g1493 185 PANTHER KINESIN-RELATED PROTEIN 6 2 185 - -
Lal19g1493 185 MobiDBLite consensus disorder prediction 141 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1493 Lal-Chr19 17345000 17352706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1493 4 141 Calmodulin-binding Proteins AT5G65930 37.681 8.50e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1493 K10393 - gmx:100778915 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1493 19 17345000 17352706 Lal19g1493 19 17345000 17352706 ECH