Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1489 GCTTCAATGGAAATGGGTACTGTTGCATGCGCTTTCTTCCTAATTTTCACTACAGTTTTCTGCCCTGATTCCTCTTTTGCTCTCACCCAAGATGGTGTGACATTGTTGGAAATCAAAAGCACATTGAATGACACTAAGAACGTTCTTAGCAACTGGCAAGAGTTAGATGAATCTCCATGTACATGGACTGGTATCACTTGTCATCATGGCGAACAACAACGAGTTCGTGAAATAAATTTGCCATATATGCAGCTTGGAGGATTTATCTCTCCAAGTATTGGCAATCTCAGTAGACTTCAGAGACTTGCACTTCATCAGAATAGCTTGCATGGAATTATTCCCAATGAAATTACCAATTGTACTGAGCTAAGAGCGCTGTACTTGAGGGCTAATTATTTCGAAGGAGGTATACCATCCAATATTGGAAATCTTCCATTTTTAAATATACTGGATTTATCAAGCAACTTACTAAAAGGTGCTATACCTTCCACTATTGGTGGTCTATCACATTTGCAAGTTCTGAACTTGTCTACCAACTTTTTCTCTGGTGAAATTCCTGATATTGGAGTACTTAGCACCTTCGGGAAAAACTCGTATATACTCTTCCTTGACATTGGCATACTTACTACCTTGGTTTTTCCGGTTTTGGCTATCAGTCTTTGTGGGCGGCAAGTTCAAAAGCCTTGTCGGGCATCACTTGGTTTCCCTGTGGTGCTACCACATGCTGAAAGTGATGAAGCTGTAGGCAAGCCCTACCAAAAGATCTTCACATTACATGAAGGGGGTAGTAATTGGTGCAATGTCATTGACGGGTCTTGCACTTGTCGTGATCCTTTCATTCCTCTGGATTCGTTTGTTGTCCAAGAAGGAAAGGACTGCGCTAAACTTATTACCTTCCATGGTGATATGCCATACACATCATCTGAGATCATTGAGAAGTTGGAGTCTCTTGATGAAGAGGATATAGTAGGATCAGGAGGATTTGGTACTGTTTACCGAATGGTGATGAATGATTGTGGTACTTTTGCTGTTAAGCGGATTGACAGAAGTCGTAAAGGGTGTGATCAAGTATTTGAAAGAGAGCTAGAGATCTTGGGAAGCATTAACCACATAAATTTGGTTAACCTGCGTGGCTATTGCAGGCTTCCAACTTCAAGGCTCCTCATCTATGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTGCATGAAAATACTGAACAAGTACTGAATTGGAGTGATCGCTTAAAGATAGCCCTCGGTTCTTCTCGGGGTTTGGCATATTTGCACCATGAGTGCTGTCCCATAATTGTGCACCGGGACATAAAATCTAGCAATATTCTCCTTGATGAAAACATGGAGCCTCATATTTCTGATTTTGGTCTTGCAAAGCTTTTGGTGGATGAAGATGCCCATGTTACCACAGTGGTTGCTGGCACATTTGGCTATTTGGCACCAGAGTATCTACAAAGTGGAAGAGCCACGGAGAAGTCAGATGTATATAGCTTTGGAGTCCTATTGCTAGAACTTATAACTGGAAAGAGGCCTACAGATCCTTCCTTTGTGAAGAGAGGTTTAAATGTTGTCGGTTGGATGAACACATTAGTGAAAGAAAACAGATTGGAAGAAGTGGTAGACAAAAGGTGCAAAGATGTAGATGCAGGAAGTCTAGAAGTAATACTAGAGGTAGCAGCAAGATGCACGGATGCGAATGCTGATGATCGTCCAACAATGAATCAGGTCCTACAAATCCTGGAACAAGAGGTCATGTCTCCTTGCCCAAGTGAATTTTATGAGTCACATTCAGATCACTCTTAA 1818 0.4153 ASMEMGTVACAFFLIFTTVFCPDSSFALTQDGVTLLEIKSTLNDTKNVLSNWQELDESPCTWTGITCHHGEQQRVREINLPYMQLGGFISPSIGNLSRLQRLALHQNSLHGIIPNEITNCTELRALYLRANYFEGGIPSNIGNLPFLNILDLSSNLLKGAIPSTIGGLSHLQVLNLSTNFFSGEIPDIGVLSTFGKNSYILFLDIGILTTLVFPVLAISLCGRQVQKPCRASLGFPVVLPHAESDEAVGKPYQKIFTLHEGGSNWCNVIDGSCTCRDPFIPLDSFVVQEGKDCAKLITFHGDMPYTSSEIIEKLESLDEEDIVGSGGFGTVYRMVMNDCGTFAVKRIDRSRKGCDQVFERELEILGSINHINLVNLRGYCRLPTSRLLIYDYLAMGSLDDLLHENTEQVLNWSDRLKIALGSSRGLAYLHHECCPIIVHRDIKSSNILLDENMEPHISDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELITGKRPTDPSFVKRGLNVVGWMNTLVKENRLEEVVDKRCKDVDAGSLEVILEVAARCTDANADDRPTMNQVLQILEQEVMSPCPSEFYESHSDHS 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1489 605 Gene3D Transferase(Phosphotransferase) domain 1 393 595 - -
Lal19g1489 605 SUPERFAMILY Protein kinase-like (PK-like) 301 586 IPR011009 -
Lal19g1489 605 SMART serkin_6 317 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1489 605 PANTHER LRR RECEPTOR-LIKE KINASE 4 604 - -
Lal19g1489 605 Gene3D Phosphorylase Kinase; domain 1 287 392 - -
Lal19g1489 605 Pfam Protein kinase domain 319 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1489 605 ProSiteProfiles Protein kinase domain profile. 317 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1489 605 Gene3D Ribonuclease Inhibitor 29 229 IPR032675 -
Lal19g1489 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Lal19g1489 605 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Lal19g1489 605 SUPERFAMILY L domain-like 28 204 - -
Lal19g1489 605 PANTHER RECEPTOR-LIKE PROTEIN 55 4 604 - -
Lal19g1489 605 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1489 Lal-Chr19 17322425 17326125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1489 10 594 Receptor kinase-like Gene Family AT2G35620 46.116 2.52e-177 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lal19g1489 Pkinase 9.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1489 - - gmx:100803920 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1489 19 17322425 17326125 Lal19g1489 19 17322425 17326125 ECH
Lal7g1408 7 19042215 19050850 Lal19g1489 19 17322425 17326125 LSH