Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1479 ATGGGATCTGGGGCTGGAAATTTCCTCATGGTCCTCCTCAAAAATTTCGATGTTCTTGCTGGGCCTGTGATTAGTCTTGTTTACCCTCTATATGCTTCAGTTAGGGCAATTGAGAGCAAATCTCCCATTGATGATCAGCAATGGCTCACTTACTGGGTTCTATATTCATTGATCACTCTCTTTGAACTTACTTTTTACAAACCTCTTCAATGGATTCCTATCTGGCCATATGCAAAGCTGATTGTAACCTTCTGGTTGGTCCTTCCTTACTTTAACGGTGCTGCATATGTTTATGAGCATTATGTGAGGCCTTTCTTGGTCAATCCTCAGACTATTAATATCTGGTACGTTCCAAAGAAAAAGGACACCTTTGCTAAGCCAGATGACATACTAACCGCCGCAGAGAAGTATATCCAAGAGAACGGAACACAAGCATTTGAGAATCTGATCCATAGGGCTGATAAATCAAGGGTTGGCGGTTATCATCCAATGTATGATGAGATCTATTGA 510 0.4137 MGSGAGNFLMVLLKNFDVLAGPVISLVYPLYASVRAIESKSPIDDQQWLTYWVLYSLITLFELTFYKPLQWIPIWPYAKLIVTFWLVLPYFNGAAYVYEHYVRPFLVNPQTINIWYVPKKKDTFAKPDDILTAAEKYIQENGTQAFENLIHRADKSRVGGYHPMYDEIY 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1479 169 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
Lal19g1479 169 PANTHER HVA22-LIKE PROTEINS 4 160 IPR004345 -
Lal19g1479 169 PANTHER HVA22-LIKE PROTEIN 4 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1479 Lal-Chr19 17269011 17271791 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1479 K17279 - gmx:100306331 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1479 19 17269011 17271791 Lal19g1479 19 17269011 17271791 ECH
Lal15g0549 15 3812125 3815878 Lal19g1479 19 17269011 17271791 PCT