Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1472 ATGGCCACCCTCACTGCACACACATTTGCCTCCACTTTGAGGCCATGTGCTTCTAAGCCAAGGTTCTTGAATGGTAACAGGGATGTGTCTGTTAGTTTTACAAAAAAGAAGACTGTTTCATACACATCTTCCTCCAAGGCTCAAGTCAGGGAAGCAGAGTGGTTGCCTAACTTGGACGCCCCAGATTACCTCACTGGCAGTCTTCCCGGTGACAATGGATTTGATCCTTTGGGATTGGGGAAGGAGCCACAGAACTTGAGGTGGTTTGTTCAAGGTGAGCTTGTGAATAGTCGTTGGGCTATGTTAGGTGTTGCAGGAATGTTGGTTCCTCAAATCATCAACAAAGTTGGTGGTACCAATTTTCCTGAATGGTTTGATGCTGGGAAAGAACAATACTTTGCATCATCCTCAACACTGTTGGTGATTGAGTTCCTTTTGTTCAATTTCGCGGAGCTCAGAAGATTGCAGGATATCAAGAACCCTGGAAGTGTTAACCAAGATCCCATCTTTAAGCAATACAGCTTAGCCCCTCATGTGCTTGGATACCCTGGTGGCTTCTTTAACCCCTTGAATTTGGAACCAACATTCGATGCTAAAGAGAAAGAACTTGCCAATGGGAGACTAGCAAAGTTGGCATTCTTGGGAAATGTGGTTCAATACAGTGTAACAGGGAAAGGACCATTTCAAAACCTCTCGGACTTTATCTCAGATCCAGTGCACAACAACATTTTCCAAAACCTTGGCCACCACTAA 753 0.4475 MATLTAHTFASTLRPCASKPRFLNGNRDVSVSFTKKKTVSYTSSSKAQVREAEWLPNLDAPDYLTGSLPGDNGFDPLGLGKEPQNLRWFVQGELVNSRWAMLGVAGMLVPQIINKVGGTNFPEWFDAGKEQYFASSSTLLVIEFLLFNFAELRRLQDIKNPGSVNQDPIFKQYSLAPHVLGYPGGFFNPLNLEPTFDAKEKELANGRLAKLAFLGNVVQYSVTGKGPFQNLSDFISDPVHNNIFQNLGHH 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1472 250 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 247 - -
Lal19g1472 250 Pfam Chlorophyll A-B binding protein 60 220 IPR022796 -
Lal19g1472 250 Gene3D Chlorophyll a/b binding protein domain 61 240 - -
Lal19g1472 250 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 247 IPR001344 GO:0009765|GO:0016020
Lal19g1472 250 SUPERFAMILY Chlorophyll a-b binding protein 48 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1472 Lal-Chr19 17222794 17224081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1472 38 244 Chloroplast and Mitochondria Gene Families AT3G61470 45.455 5.70e-61 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1472 K08910 - ath:AT3G47470 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1472 19 17222794 17224081 Lal19g1472 19 17222794 17224081 ECH