Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1471 ATGGCCACCCTCACTGCACACGCTTTTGCCACCATTTTGAGGCCATGTGCTTCTAAGCCAAGGTTCTTGAATGGTAACAGGGATGTGTCTGTTAGTTTTACACAAAGGAAGACTGTTTCATACACATCATCCTCCAAGGCTCAAGCCAGGGAAGCCGAGTGGTTGCCTAACTTGGAATCCCCAGATTACCTCACTGGCAGTCTTCCCGGTGACAATGGATTTGATCCTTTGGGATTGGCGAAGGAGCCACAGAACTTGAGGTGGTTTGTTCAAGGTGAGCTTGTGAATAGTCGTTGGGCTATGTTAGGTGTTGCAGGAATGTTGGTTCCTCAAATCATCAACAAAGTTGGTGGTACCAATTTTCCTGAATGGTTTGATGCTGGGAAAGAACAATACTTTGCATCATCCTCAACACTGTTGGTGATTGAGTTCCTTTTGTTCAATTACGCGGAGCTCAGAAGATTGCAGGATATCAAGAACCCTGGAAGTGTTAACCAAGATCCCATCTTTAAGCAATACAGCTTAGCCCCTCATGTGCTTGGATACCCTGGTGGCTTCTTTAACCCCTTGAATTTGGAACCAACATTCGATGCTAAAGAGAAAGAACTTGCCAATGGGAGACTAGCAAAGTTGGCATTCTTGGGAAATGTGGTTCAATACAGTGTAACAGGGAAAGGACCATTTCAAAACCTCTCGGACTTTATCTCAGATCCAGTGCACAACAACATTTTCCAAAACCTTGGCCACCACTAA 753 0.4502 MATLTAHAFATILRPCASKPRFLNGNRDVSVSFTQRKTVSYTSSSKAQAREAEWLPNLESPDYLTGSLPGDNGFDPLGLAKEPQNLRWFVQGELVNSRWAMLGVAGMLVPQIINKVGGTNFPEWFDAGKEQYFASSSTLLVIEFLLFNYAELRRLQDIKNPGSVNQDPIFKQYSLAPHVLGYPGGFFNPLNLEPTFDAKEKELANGRLAKLAFLGNVVQYSVTGKGPFQNLSDFISDPVHNNIFQNLGHH 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1471 250 Pfam Chlorophyll A-B binding protein 61 220 IPR022796 -
Lal19g1471 250 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 247 IPR001344 GO:0009765|GO:0016020
Lal19g1471 250 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 247 - -
Lal19g1471 250 Gene3D Chlorophyll a/b binding protein domain 61 240 - -
Lal19g1471 250 SUPERFAMILY Chlorophyll a-b binding protein 49 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1471 Lal-Chr19 17217060 17218295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1471 43 244 Chloroplast and Mitochondria Gene Families AT3G61470 45.972 3.50e-61 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1471 K08910 - ath:AT3G47470 355.14