Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal19g1468 | ATGGAGGAATTGAAGGAGCAGGGGGGGCTTCGTTTTGTGTCTAAATTGATATTATGTGCTATTTCTGCAGCTCTCACTGGCTGTTTTGCTATTGCTGGAGCACTTGGAGGAGCTTTTGTTGGTGCTTTAGCAGCCAAGGCTTCTAAGAGTAGTTTTCTCAGGGGAACTTCATTGGGTGCCATTGCTGGGGCTGTCATCTCAGTGGAAGTGTTGGAAGCTTCCCGCGACTTCTTGTTTATGGACCGAACTGGCTCACAGGGTGCATCATATATGGCACATTTCATAGATGAACTTGTTCGCGGGAGGCTTGTAGAGGAATCACTTACACCTGTTATTGTACCTGCTTACAATTTGCAGTATGAGCAGGGTCGAGTTGCTAATACAGGATATGCTGAGATTCATGATTTTCAATATGATAGCTTAGTAGCATCCAGAGGATTGTCAGGGGATTCATTGAAAAAGTTACCTCACCATGTGGTCTTGAATGCAGATACTACATGCTGCACAATATGTTTGCAGGATATTGAAGTGGGAGAAACTGCAAGAAGCTTACCTCAATGTCAGCATACATTCCATTTGATATGTGTGGACAAATGGCTTGTCAAGAATGATTCATGTCCTGTCTGCAGACAAGGTGTGTACGGTCATAAGGTATCTTCTAATGGGAGGAACAAACTTTGGGTATCTTCTAGTAAGACAGGAGCAATTGCCAGCATGCCAAGCACCTTAATGATGCCTTATAGGCCTGCTTGCTTACTCATGAATATTGTCTGCCAAGTTCAAACAGAGTAA | 792 | 0.4369 | MEELKEQGGLRFVSKLILCAISAALTGCFAIAGALGGAFVGALAAKASKSSFLRGTSLGAIAGAVISVEVLEASRDFLFMDRTGSQGASYMAHFIDELVRGRLVEESLTPVIVPAYNLQYEQGRVANTGYAEIHDFQYDSLVASRGLSGDSLKKLPHHVVLNADTTCCTICLQDIEVGETARSLPQCQHTFHLICVDKWLVKNDSCPVCRQGVYGHKVSSNGRNKLWVSSSKTGAIASMPSTLMMPYRPACLLMNIVCQVQTE | 263 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal19g1468 | 263 | ProSiteProfiles | Zinc finger RING-type profile. | 168 | 210 | IPR001841 | - | |
Lal19g1468 | 263 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 5 | 212 | - | - | |
Lal19g1468 | 263 | SUPERFAMILY | RING/U-box | 167 | 214 | - | - | |
Lal19g1468 | 263 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 133 | 214 | IPR013083 | - | |
Lal19g1468 | 263 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 5 | 212 | IPR044523 | - | |
Lal19g1468 | 263 | SMART | ring_2 | 168 | 209 | IPR001841 | - | |
Lal19g1468 | 263 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 28 | - | - | |
Lal19g1468 | 263 | Pfam | Ring finger domain | 168 | 210 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal19g1468 | Lal-Chr19 | 17198707 | 17202230 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal19g1468 | 13 | 213 | C3H Transcription Factor Family | AT1G74410 | 51.707 | 2.54e-62 | 194 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal19g1468 | - | - | gmx:100800105 | 274.248 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal19g1468 | 19 | 17198707 | 17202230 | Lal19g1468 | 19 | 17198707 | 17202230 | ECH | |
Lal14g1901 | 14 | 18393762 | 18395585 | Lal19g1468 | 19 | 17198707 | 17202230 | LSH |