Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1464 ATGGTACTTTTCAGAAAGTTGTTCCACCGAAAGCCCCCCGATCATCTTCTTCAAATCTCTGACAGAGTTTATATTGTGATCCGGTTATCTAGCTTCATGTTCATGCTTTACCATAATACTGACTGTTCCGAACTTCTCTCTTATTTTTTTCCAGTTTTTGATTGCTGTTTCTCCACTGTTGTATTGGATGAAGATGAGTACATAGCTTATATGAGAGGAATTGTGGCTCAGCTCCAGGATCACTTCCCAGATGTTTCTTTCACGGTATTTAACTTCAAAGAAGGGAACAATCACAGCCAAATATCAGGCATATTTTCTCAATATGACATGCCAGTGGTGGAATATCCTCGCCAATACGAGGGTTGTCCACTTCTGCCTTTGGAGATGATCCATCACTTTCTTCGATCAAGTGAAAGCTGGTTGTCTATGGAGGGGCAACAAAATGTGCTTTTGATGCATTGTGAAAGGGGATGTTGGCCCGTGCTGGCGTTTATGCTAGCAGGTCTTCTGTTATACACGAAACAGTACAATGGGGAGCAGAAGATTCTTGAAATGGTCTACAAGCAAGCCCCTAGAGAACTTTTCAACTTTTTAACTCCCTTGAACCCACAACCTTCTCAATTAAGATATCTTCGGTATATTTCCAGGAGACATTTGCGTTCCGAGTGGCCCCCATCAGATACACCCTTGTATTTGGACTGTCTGACTCTTAAAGATCTTCCATCATTTGATGAAGGAAAAGGTTGCAGACCTGTTGTACGTGTTTATGGTCCAGACCCTTCAAAACCTGCCAATAGTAGAAGTTCAAAACTTATTTTTTCAACTCCAAAATCCAAAAAACATATTCACCACTACTCACAGGCAGAATGTATGCTCGTGAAAATTGATATCCATTGTCACGTTCAAGGGGATGTCATTCTTGAGTGCTTACATGTGAATGAAGATTTTACTCGTGAGGAGATGATGCTTAGAGTCATGTTCCATACTGCATTTGTGCGGTCAAATATATTGATGCTGAGCCGTGATGACATTGATATTTTGTGGTATGCAAAGGATCAATTTCCCAAGGATTTCAAAGCAGAGGTGCTTTTTTTGGATAATGATGCTGTTATACATGATCTAACCATAGTCAATGTGAGTGAAGATGCAAATGAGACTGAAAGTTCTTCATCTGAGAAATTCTATCAAGTAGAAGATATTTTCAGCAATGTAATTGATGCACGAGAAGGAAAGGAGGAGTATGATTCTCTTGCTTTCCATGACAATGCAGTGGATGATGAAAATTATAAAGAGGCTTGGAAAGAGAAGGTGAACAATCATGCTTTAGACAAGGGAAATAACAAACAGGTTGACAAAATGGATACTGGTATTAAGGTGAAAGACATATTTGTTGATAATGTGAAGTACAGGATCAATGAGAGCATGGATTCAAACAATGATGCAGTGAAAGACATTGCTGTGGATGAAGGAGAAAATAAGTCAAATTCTACTGCATTGGCTTCTGGTAAAATTCTGGAAACCACTGAAGTTACCTTGGACATGCACGGGGAATTGACACTTGAGCAAAACAAATACGGCGAAGATGACAAAGCAACAGAAATTGAATTAGATCCCATCCAACTCCATCCAACTAAATCTGGTAAATTACTTCTATCTTCTACAAAGAAACAACTTCCATCCAACTCAAAGCCTTTCGGTGATACAATTTCAGCAAAACCAAAGATTAAACAGCAAGAGTCACAAAGTTTTCAGGTAAAACAAGCTAAGCCGAATGCAGTAACTAGGTGGGTTCCTTCTAACAAGGGTTCTTACACAAGTTCAATGCATGTCTATTACCCGCCATCAAGGATTAATAGTGCACCAGCTGCTCTGCCAAAATTTATTGCTTCAAAGGAGAAAATGGAAGATTTCAAAGGAAGATCTTTATCTGCTCCTGCTGCTTCTATTGACATGCCAAATGACCTGAAAGGTCGTAAGGTGGCCACTTCAAAATCTTCAGGCCACATGGTACCAGAAGTAGATGCAAACTGTCCACCATCATCGTTACTGTCAATTAAAGAAACATCTCTTCAGTCAGCTACTAAAACACAAGAAGTGAGCTCAGATAAAGTGCTACGGCCTCCTCCACCGCCTCCGCCTCCGTCTCCATCACGTGCCAGAAACTCTTCTTTCGGTGCTTTTGAACATTTATCATTACAGGATGAAGCATCACCTCTTTCCCCTGCATCACCACTAGTGTCACCATCTTCCCCTTTAGGTGGAAAGGTATCTACTGCACCTCAGCCACCACCAACTTTAATATCATTTACTGAACAAAAAGTCGGGGCGAATTTACAAAATAAAGGGAGCTTTCTACCTTCTCCATCTCCTTGGAAATCTGTCTATTCATCAATTGTCATAGTTGAGGAGACAAGAGGTTCTCTTCCACTTCCCTCATCCTTCAGTGAAAATTTATCAAAACTTTCTGAAGTGCTTATTGTAACAGCCACTCCTCCACCTCCACCACCACCATTGCCTCCTCCAAGGTACGAAGTTTCATCCATTCCTCCTTCTCCAACACCACCATCAACAGCAACTCCCCCAAAGCGTGGAATTCCCGCTCTGCATACATTTTCCACACATAGGACTTCAGCCCCTCCTTCTCCACCACTGCCAACTGCATCGCATAAAGCTCCATCAGCACCCTCTCCGCCCCCACCTCCACCACCGCCACCTCCTTATAGTATTACTCCACCACCACCAGTTCCTCCCTTTAGTAAAGCCCCACCTTCACCACCACCACCTCCTTATAGTAGTACTCCACCACCACCATGTCCTCCCTTTAGTAAAGCCCCATCCCCACCACCTCCACCTCCTTATAGTAGTGCTGCTCCGCTGCCCCCGCCTCCTCCTCCTTTTAGTAAAGCTCCACTGCCCTCTCCCCCGCCTCCACCTCCTTATAGTAGTGCTCTACCACGTTCTCCTTTTAGTAAAGCTCCTCAGCCACCACCTCCCCCTCCTTACAGTAGTGCTCCGTCACCACCACCTCCTCCTTTTAGTAAAGCTCCCCTGCCACCTCCTTATAGTAGTGTTCCACCAACCCCACCTCCGCCTCCATTTGGTAGAACTCCACCAACCCCACCACCACCTCCTCCATCAAATGGAGCCCCGCCTCCACCTCCACCTCCTCCATTAAGTGGAGCTCCAGCACCACCCCCACCTCCTCCAATGCATGGAACCCCACCTCCTCCGCCCCCTCCTGGTGGTCGAGGACCACCTCCTCCTGCTGGTGGTGCACCTCCAGCCAAAGGTGCAAATGGTGATCTAAAAGTGAGAGGGCGTGGTGCAATGGCACCGAAGAGATCCGCTTTCAAGCCTCTACATTGGAGTAAGGTTACAAGGGTTTTGCAAGGAAGTTTATGGGAAGAACTTCAAAGACATGGAGAACCTCATATTGCATCTGAGTTTGATGAATCAGAGTTAGAGAAGCTTTTCTCTGCAAATGTTGCAAAACCTGCTCATTCTAAAACCGCAGGGCGGCGTAGATCTCTTGAATCTAAAACAGACAAAGTCCGCTTGATTGATCTGAGGAGGGCTAATAATACTGAAATTATGCTCGCTAAGGTTAAGATGCCACTTCCTGATATGATGGCCTTAGTACTGGCTATGGATGAGTCAGTATTGGATGTTGATAAGGTGGATAACCTCATTAAGTTTTGTCCGACCAAAGAGGAGATGGAACTTTTGAAGGGATACACAGGTGACAAGGAGAACTTGGGGAAGTGTGAACAGTTTTTTTTGGAGTTGATGAAGGTGCCACGGGTAGAATCAAAATTAAGAATATTTTCTTTCAAGATTCAGTTTGGGTCTCAGGTCACAGAATTTAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGAAATTCTGTCAAACTGAAGGAGATCATGAAGAAAATTCTTGTTTTAGGTAATACATTGAATCAAGGAACAGCAAGGGGTTCCGCAGTTGGATTCAGGTTGGATAGTCTCTTAAAGCTCACTGATACTCGTGCTACTAACAATAAGATGACACTAATGCATTATCTTTGCAAGGTCCTTGCTGAAAAGTCACCTAGACTCCTTGATTTTCATGTAGACCTTGTTAGCCTGGAATCTTCCACCAAGGTGATGATCTATTTTTGGTTCTTTACAGTAAAAAAAGGTGCAAATAACCTCCTTCAACTTTGGCCAATATCACCTATGGTTTCAGTTGTGATACAATTGAAGTCATTAACAGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAAACAGGAGCTTGCTGCATCTGTAAATGATGGACCTGTGTCCGACATTTTCCATAAGACATTGAAAGGTTTCATAGATGTAGCTGAGTCCGAGGTGGAATCTCTAACAAATCTGTATTCTTTGGTGGGTAGAAATGCAGATGCACTTGCACTATACTTTGGTGAGGATCCTGCTCGTTGCCCATTTGAGCAAGTTACTGTAACTCTCTTAAATTTTGTGAGGTTGTTTCGGAAAGCACATGAAGAGAATTGCAAACTAGCAGAGTTAGAGAAGAAGAAAGCTGAAAAAGAGGCTGAAATGAAGAAGGCCAAGGGAAAGACAAAGAGGGGCGCAAAAGATAGTTGA 4647 0.4334 MVLFRKLFHRKPPDHLLQISDRVYIVIRLSSFMFMLYHNTDCSELLSYFFPVFDCCFSTVVLDEDEYIAYMRGIVAQLQDHFPDVSFTVFNFKEGNNHSQISGIFSQYDMPVVEYPRQYEGCPLLPLEMIHHFLRSSESWLSMEGQQNVLLMHCERGCWPVLAFMLAGLLLYTKQYNGEQKILEMVYKQAPRELFNFLTPLNPQPSQLRYLRYISRRHLRSEWPPSDTPLYLDCLTLKDLPSFDEGKGCRPVVRVYGPDPSKPANSRSSKLIFSTPKSKKHIHHYSQAECMLVKIDIHCHVQGDVILECLHVNEDFTREEMMLRVMFHTAFVRSNILMLSRDDIDILWYAKDQFPKDFKAEVLFLDNDAVIHDLTIVNVSEDANETESSSSEKFYQVEDIFSNVIDAREGKEEYDSLAFHDNAVDDENYKEAWKEKVNNHALDKGNNKQVDKMDTGIKVKDIFVDNVKYRINESMDSNNDAVKDIAVDEGENKSNSTALASGKILETTEVTLDMHGELTLEQNKYGEDDKATEIELDPIQLHPTKSGKLLLSSTKKQLPSNSKPFGDTISAKPKIKQQESQSFQVKQAKPNAVTRWVPSNKGSYTSSMHVYYPPSRINSAPAALPKFIASKEKMEDFKGRSLSAPAASIDMPNDLKGRKVATSKSSGHMVPEVDANCPPSSLLSIKETSLQSATKTQEVSSDKVLRPPPPPPPPSPSRARNSSFGAFEHLSLQDEASPLSPASPLVSPSSPLGGKVSTAPQPPPTLISFTEQKVGANLQNKGSFLPSPSPWKSVYSSIVIVEETRGSLPLPSSFSENLSKLSEVLIVTATPPPPPPPLPPPRYEVSSIPPSPTPPSTATPPKRGIPALHTFSTHRTSAPPSPPLPTASHKAPSAPSPPPPPPPPPPYSITPPPPVPPFSKAPPSPPPPPYSSTPPPPCPPFSKAPSPPPPPPYSSAAPLPPPPPPFSKAPLPSPPPPPPYSSALPRSPFSKAPQPPPPPPYSSAPSPPPPPFSKAPLPPPYSSVPPTPPPPPFGRTPPTPPPPPPSNGAPPPPPPPPLSGAPAPPPPPPMHGTPPPPPPPGGRGPPPPAGGAPPAKGANGDLKVRGRGAMAPKRSAFKPLHWSKVTRVLQGSLWEELQRHGEPHIASEFDESELEKLFSANVAKPAHSKTAGRRRSLESKTDKVRLIDLRRANNTEIMLAKVKMPLPDMMALVLAMDESVLDVDKVDNLIKFCPTKEEMELLKGYTGDKENLGKCEQFFLELMKVPRVESKLRIFSFKIQFGSQVTEFKKSLNTVNSACEEVRNSVKLKEIMKKILVLGNTLNQGTARGSAVGFRLDSLLKLTDTRATNNKMTLMHYLCKVLAEKSPRLLDFHVDLVSLESSTKVMIYFWFFTVKKGANNLLQLWPISPMVSVVIQLKSLTEEMQAIIKGLEKVKQELAASVNDGPVSDIFHKTLKGFIDVAESEVESLTNLYSLVGRNADALALYFGEDPARCPFEQVTVTLLNFVRLFRKAHEENCKLAELEKKKAEKEAEMKKAKGKTKRGAKDS 1548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1464 1548 MobiDBLite consensus disorder prediction 736 767 - -
Lal19g1464 1548 Pfam C2 domain of PTEN tumour-suppressor protein 227 364 IPR014020 -
Lal19g1464 1548 MobiDBLite consensus disorder prediction 828 861 - -
Lal19g1464 1548 MobiDBLite consensus disorder prediction 704 718 - -
Lal19g1464 1548 PANTHER FORMIN-J 1 1542 - -
Lal19g1464 1548 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 101 215 IPR029021 -
Lal19g1464 1548 Coils Coil 1511 1540 - -
Lal19g1464 1548 Coils Coil 1417 1437 - -
Lal19g1464 1548 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1182 1539 - -
Lal19g1464 1548 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 228 364 IPR035892 -
Lal19g1464 1548 Gene3D Formin, FH2 domain 1107 1521 IPR042201 -
Lal19g1464 1548 MobiDBLite consensus disorder prediction 878 1093 - -
Lal19g1464 1548 SMART PTEN_C2_2 225 366 IPR014020 -
Lal19g1464 1548 MobiDBLite consensus disorder prediction 645 767 - -
Lal19g1464 1548 SMART it6_source 828 1548 IPR015425 -
Lal19g1464 1548 MobiDBLite consensus disorder prediction 827 1112 - -
Lal19g1464 1548 Pfam Formin Homology 2 Domain 1112 1385 IPR015425 -
Lal19g1464 1548 Pfam Formin Homology 2 Domain 1415 1510 IPR015425 -
Lal19g1464 1548 ProSiteProfiles C2 tensin-type domain profile. 227 367 IPR014020 -
Lal19g1464 1548 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1107 1536 IPR015425 -
Lal19g1464 1548 MobiDBLite consensus disorder prediction 681 701 - -
Lal19g1464 1548 Gene3D - 231 364 - -
Lal19g1464 1548 Gene3D Protein tyrosine phosphatase superfamily 44 230 IPR029021 -
Lal19g1464 1548 MobiDBLite consensus disorder prediction 1528 1548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1464 Lal-Chr19 17179333 17191143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1464 1 651 FH2 protein (formin) Gene Family AT5G07740 53.904 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1464 - - lang:109353635 1392.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1464 19 17179333 17191143 Lal19g1464 19 17179333 17191143 ECH
Lal7g1375 7 18829150 18841369 Lal19g1464 19 17179333 17191143 LSH