Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1463 ATGGGGTGTGTGTTTGTGAAGCAAGAGGTGTCAGTGACCCCTGCTATTGATATCTCAGTTGAGTCAGGTAGGAACAACAATAAGAAGAATAAGACTGAGTCAGTAAGAGGGAGTTGGAGCGAGGTGGGTGAGTCAGGGAGGGTGAGTGACTCATTGAGCTTCAGGTTTGGGAATCTGCATAAGTATGTTGAAATGGAGCAGGCTGCCGCAGGTTGGCCCGCTTGGCTCACCGCCGCCGCCTCTGAAGCTATTCATGGTTGGGTGCCTCTACATGCTGATGCATTTCAGAAACTTGAAAAGATTGGGCAGGGTACATACAGCAGTGTTTTCCGGGCAAGGGAGCTTGAGACTGGGAAGATAGTGGCTCTGAAAAAGGTAAGGTTTGACAGTTTTGAGCCAGAAAGTGTTAGGTTTATGGCGCGAGAGATAATGATTCTTAGAAGGCTTGATCATCCAAACATCATTAAATTGGAAGGCTTGATTACTTCTAGATTGTCTTGTACCATATACCTTGTGTTTGAGTACATGCAGCATGACATCACAGGACTCTTGTCCAGACCAGAAATAAAGTTTAGTGAATCACAGATTAAGTGCTACATGAAACAATTGTTATCAGGCCTTGAGCATTGTCATTCACGGGGTGTAATGCACCGAGACATCAAAGGATCAAATCTTCTGGTGAATAATGAAGGGATATTAAAGGTGGCAGATTTTGGATTGGCTAACTTCAACTCCGGGAATAAGCAGCCCTTAACAAGTCGTGTTGTTACCTTATGGTACCGACCTCCAGAACTTTTGCTCGGTTCAACAGATTATGGTCCATCTGTGGATCTCTGGAGTGTTGGTTGTGTTTCTGCAGAGATACTGGTTGGGAAGCCTATACTTCAAGGGAGAACTGAGGTTGAACAATTGCACAAAATCTTCAAGCTTTGTGGTTCCCCACCCGAAGGTTACTGGAAAAAGACTAGACTTCCTCATGCAACTTTGTTCAAGCCACATCAACCATATGACAGCTGCCTCCAGGAAACATTTAAAGATTTGCCTGCAAGCACTGTAAATCTGCTACAAACCCTTCTTTCTGTCGAACCAAACAAACGCGGTACAGCCTCATCAGCTCTCTCATTGGAGTATTTCAAAACAAAACCTTATGCATGTGATCCATCAAGCTTGCCAGCATATCCACCTAGCAAGGAGATCGATGCAAAACCCAATGAGGAATCAAGAAGGAAAAAGATCGGTGGGCGAGTTTGTGGACATGAAACAAGAATGCCATCAAGAAAGCCACTAGGAGTAGGACTCAATAAATTAGCCCCACCAGAGGGTTTGATTAGTCAAACTCAAAATGCACAAAAGGTTGATGGTAGATATATCCACATCCTTAAAGAATATACCACAAGCATAGGTGAAGAGGCACCAAAGTCATATAGTGGTAAACCAGAAGATGTTTTCCATGTGAAGAATGCATCTCAAGTAGATATTCACAACATTCCCTTTCCTGGACAATTGCAAGTTTCAAAATCTAGTGGCTTTGCTTGGGCAAAAAGGCATAAAAATGACAATTCAGTTAGATCACATTGCCGAACTATTTCTAGAGGGCACATATTTAACTCATTAGAAACTTGCACACTAAATTCAAGGAACAATTCTGACTCCGGAAACCATGATAGTAAGGAAATTTGTGGTGGGCGCACTAACTCAAGGGGCCATGACATACTTGAAATATCTAAGCTTGCTATGCAAAGTCAACGGAGTAAGTTTGATGGTCAAGATTCATTTGATACTTCTGATGAGTACCATTCACAAGAACTATCTATGGCTCTTTATCGGAGAAATGATTCATTATCCAAGAGAAGTAGCCAGAGTTATCAGGATGAAGCAGAAAAGGTTGAATATTCAGGACCCTTACTATCTCAGATGCACACAGTTGATGAGCTGTTAGAAAGACATGAACATCACATCCAGTGTATTGTCAGAAGATCATGGTTTCAAAAAGGTATAACAGTAAGAAGCATGGGAAGTAATTGCAAAGGATTTAGGAAGGGTATAAAGTATAGGCCTATAACATCATATCCAAATGACACAAGAAGTCCTTGTAAGAGGTTATAG 2106 0.4202 MGCVFVKQEVSVTPAIDISVESGRNNNKKNKTESVRGSWSEVGESGRVSDSLSFRFGNLHKYVEMEQAAAGWPAWLTAAASEAIHGWVPLHADAFQKLEKIGQGTYSSVFRARELETGKIVALKKVRFDSFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCTIYLVFEYMQHDITGLLSRPEIKFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLANFNSGNKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVSAEILVGKPILQGRTEVEQLHKIFKLCGSPPEGYWKKTRLPHATLFKPHQPYDSCLQETFKDLPASTVNLLQTLLSVEPNKRGTASSALSLEYFKTKPYACDPSSLPAYPPSKEIDAKPNEESRRKKIGGRVCGHETRMPSRKPLGVGLNKLAPPEGLISQTQNAQKVDGRYIHILKEYTTSIGEEAPKSYSGKPEDVFHVKNASQVDIHNIPFPGQLQVSKSSGFAWAKRHKNDNSVRSHCRTISRGHIFNSLETCTLNSRNNSDSGNHDSKEICGGRTNSRGHDILEISKLAMQSQRSKFDGQDSFDTSDEYHSQELSMALYRRNDSLSKRSSQSYQDEAEKVEYSGPLLSQMHTVDELLERHEHHIQCIVRRSWFQKGITVRSMGSNCKGFRKGIKYRPITSYPNDTRSPCKRL 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1463 701 ProSiteProfiles Protein kinase domain profile. 95 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1463 701 Gene3D Transferase(Phosphotransferase) domain 1 178 417 - -
Lal19g1463 701 Pfam Protein kinase domain 95 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1463 701 SMART serkin_6 95 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1463 701 PANTHER CELL DIVISION PROTEIN KINASE 37 662 - -
Lal19g1463 701 SUPERFAMILY Protein kinase-like (PK-like) 88 385 IPR011009 -
Lal19g1463 701 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 37 662 - -
Lal19g1463 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Lal19g1463 701 Gene3D Phosphorylase Kinase; domain 1 82 177 - -
Lal19g1463 701 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Lal19g1463 701 MobiDBLite consensus disorder prediction 544 565 - -
Lal19g1463 701 CDD STKc_CDK9_like 95 378 - -
Lal19g1463 701 MobiDBLite consensus disorder prediction 389 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1463 Lal-Chr19 17172527 17178011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1463 87 410 Core Cell Cycle Gene Families AT5G10270 49.560 4.78e-107 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lal19g1463 Pkinase 2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1463 - - gmx:100784406 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1463 19 17172527 17178011 Lal7g1374 7 18820973 18826488 ECH
Lal19g1463 19 17172527 17178011 Lal19g1463 19 17172527 17178011 ECH
Lal7g1374 7 18820973 18826488 Lal19g1463 19 17172527 17178011 LSH