Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1451 ATGGCGTCTGCGAAACGGTGCCATTACGAGGTCCTCGGCGTCTCCCATGACTCCACCGCCGACGGAATCCGATCAGCTTACCGCCGCCTCGCCCTTCAGCGCCATCCTGACAAACTCGTCCAATCCGGCATCTCCCAATCCGAAGCCACCGCTCAGTTTCAGGAGCTTCAACATGCCTACGAGGTTCTATCCGATCCTAAGGAACGTGCTTGGTACGATTCTCACCGTTCTCAGATCCTATTTTCCGATCCTAACTCCGTTGGTAGCTCCGTCATCCCTGACCTATTCTCATTTTTCTCCAACACAGTATTTAACGGTTACTCCGATTCCGGCAAGGGTTTCTATAAGGTGTATTCCGATGTGTTTGATAAAATTCATGCTAATGAGATCAATTTCGCCAAGAAGATGGGGATCGGTGTTGATTCTGTTCGACAGGCTCCAGTTATGGGGAATTTGGAGAGTCCTTACACTCAGGTTACAGCGTTTTATAGTTACTGGCTTGGTTTTGCGACGGTTATGGATTTCTGTTGGGTTGATGAGTATGATGCTATGGCTGGTCCGAACCGGAAGTCGAGGAGGCTTATGGAAGAGGAGAATAATAAGGCGAGGAGGAAGGCGCGAAAGGAGTATAATGATACAGTTAGGAAATTGGCTGATTTCGCGAAAAAGAGGGATAAGAGGGTGATTGATATGAAGGTGAAGAAGAATGCTGAGATGGAGAAGAAAAAGGAGGAAGAGAGGGAGATGAAGAGAAGGCTAGAGAAGGAGAGGAAGGAGAGGGTTATGAAGTATGAGGAGCCGGAGTGGGCGAAGGTGGAGGATGATTGGGTTGAGGAGTTGGAGGAGGACAAGAAGGCCGGGAAAGATTTAAGAGTGAGAAGCAGTGGAAGAATCATGAGCAGTCTAAGAAAGCATAAGGAGAAGGTTGTCGAGTTCAGGGATTCAATTGATGATGATGAAGAGGAGCAAGTTGAAGAGGATTTAGAAGTAGAAGGAGAAGGATTGGATAGTGAGGCATATGGAATTGAATTGAATGATGATTGGTTGGTGGACGATGAGTATGGAGTTGATGATTTGGAAGGGAGAGTTAGAGATGGTCTCAATGTTGACAAGGAGGAGTCTAAAAATGGAGTTGAGCTTGACAACGAGGATGGTGGTGAATTTTTTGATGCAAAGGAAGGACATGCGGTTGGTGTGTCGGTAGATTTTGATGAAGATGATGAAATTGGTGTTCTTGAAGCAATGGTGGCTGGACACAAGAGTAGAAAACCCAGTGCTTCAACGCAGAAGCCCGAGGGTTCGGCGGGCACAACCCACATTGAGAATGATGGGGATGGCCCTATGGAATATGACAATAGGAAGAGTGCAAGAAAGAAACGACGCAACAGGAAAGAGAAGGGTAAAGAAAACTGGGAAGAATCTCATGTGCCTGCGGCCAACGGGGAGCTTGAGAATTTGGACTGTAAGGGAAATGACGATTCTTATGCAGAGGAGTCTTCTTCCTCCCAACATTTTGTGGGAAATGAGGTTAATGATAAAGAGAATGAGGCTGTAGGTAGAGATAAGAAAGGAAATGCAAAGGACACAAAAACCAAAGCAAAAACTTCATCCGAAGGAAGAAAAGGAAAGGCAACTTTGAAGAATGTTGGCAATAGCTGTGACATAATTCATGTCTTTCTCTCTGGAATAAATTACATATGCTTCTTGGCGAGACTGGGCATGCCACAATTAAAGGGCGATAAGGAATTACTACTACAAATATTTGATTTCACGTATATACATCTTAGAGTTCAAGATATTGACCAAACTTCAATTATTAACAGTGCAGTTGAGAAAGAAATGGATACACAGAACTCCCTGTGTGATGTTGCAATAATTGAGTAG 1884 0.449 MASAKRCHYEVLGVSHDSTADGIRSAYRRLALQRHPDKLVQSGISQSEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSVGSSVIPDLFSFFSNTVFNGYSDSGKGFYKVYSDVFDKIHANEINFAKKMGIGVDSVRQAPVMGNLESPYTQVTAFYSYWLGFATVMDFCWVDEYDAMAGPNRKSRRLMEEENNKARRKARKEYNDTVRKLADFAKKRDKRVIDMKVKKNAEMEKKKEEEREMKRRLEKERKERVMKYEEPEWAKVEDDWVEELEEDKKAGKDLRVRSSGRIMSSLRKHKEKVVEFRDSIDDDEEEQVEEDLEVEGEGLDSEAYGIELNDDWLVDDEYGVDDLEGRVRDGLNVDKEESKNGVELDNEDGGEFFDAKEGHAVGVSVDFDEDDEIGVLEAMVAGHKSRKPSASTQKPEGSAGTTHIENDGDGPMEYDNRKSARKKRRNRKEKGKENWEESHVPAANGELENLDCKGNDDSYAEESSSSQHFVGNEVNDKENEAVGRDKKGNAKDTKTKAKTSSEGRKGKATLKNVGNSCDIIHVFLSGINYICFLARLGMPQLKGDKELLLQIFDFTYIHLRVQDIDQTSIINSAVEKEMDTQNSLCDVAIIE 627
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1451 627 MobiDBLite consensus disorder prediction 415 543 - -
Lal19g1451 627 SMART dnaj_3 6 68 IPR001623 -
Lal19g1451 627 MobiDBLite consensus disorder prediction 313 336 - -
Lal19g1451 627 Coils Coil 302 322 - -
Lal19g1451 627 MobiDBLite consensus disorder prediction 422 436 - -
Lal19g1451 627 ProSiteProfiles dnaJ domain profile. 7 76 IPR001623 -
Lal19g1451 627 Coils Coil 192 212 - -
Lal19g1451 627 MobiDBLite consensus disorder prediction 365 389 - -
Lal19g1451 627 Gene3D DnaJ domain 1 86 IPR036869 -
Lal19g1451 627 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Lal19g1451 627 PRINTS DnaJ domain signature 9 27 IPR001623 -
Lal19g1451 627 PRINTS DnaJ domain signature 27 42 IPR001623 -
Lal19g1451 627 PRINTS DnaJ domain signature 48 68 IPR001623 -
Lal19g1451 627 CDD DnaJ 7 65 IPR001623 -
Lal19g1451 627 MobiDBLite consensus disorder prediction 314 336 - -
Lal19g1451 627 Coils Coil 229 259 - -
Lal19g1451 627 MobiDBLite consensus disorder prediction 509 541 - -
Lal19g1451 627 Pfam DnaJ domain 8 73 IPR001623 -
Lal19g1451 627 SUPERFAMILY Chaperone J-domain 4 99 IPR036869 -
Lal19g1451 627 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 1 556 IPR044648 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal19g1451 Lal-Chr19 17090525 17095869 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1451 3 554 C2H2 Transcription Factor Family AT1G74250 47.078 6.97e-143 427
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1451 K09506 - gmx:100788305 652.899
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1357 7 18713888 18716840 Lal19g1451 19 17090525 17095869 LSH