Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1443 ATGGCTGCAAAGTTTCTACATTCTTCAGCAGATGATAACCCTGATTTGCAGAAACAGATTGGATGCATGACTGGGATTTTTCAACTCTTCGATCGTCATCATATGGTTACTCCTCTCCTCATTAGCCACAAGAGGCTTTCTCCAGCTCATGACATTTGCACCACTGGTTCTGACCTTCTTGGTATAATGTTTGTATTCAAATCTAATGCTTCTGCTTTCCTTACAGGTAATTCCCACTTCAATAATGACAACCTGGAAAGAGAGTCTAATGGCATTCGACATCGACAAACAGGGCCCGATATAAGCTTAAGCAAGGGTGTTAGTGAAAAACAAAGAGTTTCAACAGAATCATCAAGAGTTTCATTCTCTTCTTCTGGTTCATCATCAATGTCCTCTCTGGACTTCAAAGCTCAAGTAGATGCTCCCAATGACCAGATTAATTTTCCTGAACCTCCAACGAGGGACACAATTATGAACCAAAGAAGCACCTCTCCTCATTTAGGACACCAGTCCCTTGACTTGAGGGATGTGGTGAAGGACTCAATGTATAGGGAGACTAGAGGACTATCATTGAGGACGACACCCAAAGAGGAGGCCGCAATTTGTGTCATGAAGCACAGGGATTCTCCAAGACCTCTTCAGCTGTACAAATCTGATGGATATGATAGAGTTGGAATAGATGGAAAACAAAGTGCTCCTATAGATGTAAAGGACTCTTTCCGAGTCCTGGCTAAACTTAGAGAAGCACCTTGGCATTATGGTGAAGCAATAGAGCCATCCAGATTATTATCCTATGAAGTAAAGGATGGAGGAAACTGGTATTCTATCTCAAAGGATGCGCCTCGGTTTTCTTATGATGGAAGAGAAATGAGTCGTTTATCTTTCGAAACAAGAGAAACTATCAAATGCCAACCAAAGCTGCCAGAGCTTCCTAGACTTTCACTGGACAGTAGGCAAGGTTCTTGGAGCACATACAATCCTGATTCAAAGAAACACAGTCACTTAAAAAATATCAGTACTGGTAACTCCACCTCAGATGACAGTCTCTCTGGTCTACAACAGTCTTCGTCAACGCAAAGCCGGCCACCTAGTGTTGTAGCAAAACTAATGGGCTTGGAAGCATTGCCAGAGTCCTATTTGGCCAATGAAGCTCAACCAAGTTTGAGTGAAACTGGCTCAACTCGAGGTAATGGCCAGTTTTCAAGATCATCAAAAGATGGATTCATTAGGCCAGTTCAGATTTCTAATTCCCCAAAAAGCTCATTGAAAGACCTGAGTTCCCCACGGCGGAAGAATCCTGATGCGGTTGTGAAACCAATCTCAAGTTCAAGGTTTCCCATTGAGCCTGCACCGTGGAAGCAGCAGGATGGAAACAGAAGCTCCAAGAAATCAAATTCCAAGGCCTTAAAAGCTCCAGCAAAAACACCAGATTCAGTTCCTTCAGTTTATAGTGAGATTGAAAAGAGATTGAAGGATCTAGAATTTAAACAATCTGGAAGGGACCTTAGAGCACTCAAACAGATACTGGAAGCAATGCAAGTAAAGGGGCTGTTAGAGACTAGAAAAGAAGAACAGGCTTCAAACATTGTTTTAAGTCAAAGAGAGTATGAACCAAGACCTTTAAGTCTAATTCAGAATTCAAGGTCAACGAAGCAGCAAAGTTCACACGGAAACAATCTTGTATTCAACACAATTAGGGGATCTGACTCAGCAAGGACTTTTGAATCTCCAATTGTGATCATGAAACCAGCAAAACTTATTGATAAAACTGGAACTTCAGCGTCTTCGGTCATTCCAGTTGTGGGCCTTTCTGATCATAGACTTCAAAGTGGTTGTGGTGTACAAGCATATAATAAAAAAGGTACAGCTTCTGGTCGAATAGCAAAAGATCAGTCACCAAAAACAACTAACAGGGATGCATCTACCAGTTCCAGTGATAAGAAAGCTAGTAGTAGTAGCAAGACTACAAAATCAACACAATCACAGCCAAGATCTCAACAATTTCCAGGTTCAGTAAAGAACTCAGGATCTGTAAGCCCGAGATTGCAACAGGCGAAGTTAGAATTGGAGAAGCGATTACGTCCGCCTACCCCACCATCAGATTCAAATAAACCAAGAAGGCAATATGGTAAGCAGGCAACAGAGTCAGTTTCACGAGGCCGTAAACTGAGACATAAAGTGCCTAATACACAGCACAGTGATGATCAACTGAGTGAGATAAGCAATGAGTCAAGAAGTCTAAGTTGCCAAGGGGATGAAATGTCTCAGAAATCAGACAGTATAGCTGACAATTTGAACATTGATATGAAAGTCACCAGTAGTTTACGATCTGCTAGAATTATTAACCAAAGTCCATCTTTGAAAGCTAGTGAGCAGTTGGTTTCAGGATCAATGCACAAGAAATCAACTCTAAGGTTGGATGAGAATGAGTCAATTGCAGAACTTGCAACAGATGGTCCAGATCATCCAAGTCCAGTTTCAGTTCTGGATGGCTCAGAATACACAGATGATGTGCCCTCCCCAGTAAAGCATATATCCAATGCTCCCAAAGTAGCTGGTAATGCTGAAGAATCTAAAGAAACCAATAGTGAAGATCAGTGGAACCCTGCCGATAGCTTTTCATTTAACAGCACTGGAACTGGAGAGATCAACTGCAAGAAATTGCAGAGCATAGATCACCTTGTTCAGAAGCTTAGACGGCTAAACTCAAGTCACGATGAATCTAGAATTGATTACATCGCTTCCCTTTGTGAAAACTCAAATCCAGACCACAGATACATATCTGAAATACTGTTAGCTTCAGGCCTCCTACTCAGAGATCTAAGTTCTGAATTGCTCACATTTCAAAACCACTCATCAAGTCATCCCATCAACCCTGAGTTATTCCTTGTATTGGAGCAGACCAAGGCAAGTAGTTCGCTTTCTAAAGAAGAAACCTTCCCTGGAAAAGTTGCATACACGAAGCCTAATTCCGAAAAGTTTCATAGGAGACTCATCTTTGATGCTGTAAATGAGATTCTAGGTGCAAAGTTAGGCTCTTGTCCTGAACCATGGTTGAAGAGTAATGGAGTATCAAAGAAAACCCTGAGTGCACAAAAGCTTCTTAAAGAATTGTGCTTGGAGATAGAGAAAATGCAAGGCAAGAAGCAAGAAATGAGTATAGAAGATGAAGGGGATGGTCTAAAAAGTATGTTATGGGAAGATATGATGCATGGCTCAGAAAGTTTTTGGACAAAATTCTATGGTGAAATACCTTTGGTAGTGTTGGATGTTGAGAGACTCATATTTAAGGACTTAGTTGATGAGATTTTGATTGGTGAAGCTGCTAGCTTGAGGGTCAAGTCAAGTAGCCGCAGGAAGCTATTTGCAAAGTAG 3375 0.4142 MAAKFLHSSADDNPDLQKQIGCMTGIFQLFDRHHMVTPLLISHKRLSPAHDICTTGSDLLGIMFVFKSNASAFLTGNSHFNNDNLERESNGIRHRQTGPDISLSKGVSEKQRVSTESSRVSFSSSGSSSMSSLDFKAQVDAPNDQINFPEPPTRDTIMNQRSTSPHLGHQSLDLRDVVKDSMYRETRGLSLRTTPKEEAAICVMKHRDSPRPLQLYKSDGYDRVGIDGKQSAPIDVKDSFRVLAKLREAPWHYGEAIEPSRLLSYEVKDGGNWYSISKDAPRFSYDGREMSRLSFETRETIKCQPKLPELPRLSLDSRQGSWSTYNPDSKKHSHLKNISTGNSTSDDSLSGLQQSSSTQSRPPSVVAKLMGLEALPESYLANEAQPSLSETGSTRGNGQFSRSSKDGFIRPVQISNSPKSSLKDLSSPRRKNPDAVVKPISSSRFPIEPAPWKQQDGNRSSKKSNSKALKAPAKTPDSVPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQVKGLLETRKEEQASNIVLSQREYEPRPLSLIQNSRSTKQQSSHGNNLVFNTIRGSDSARTFESPIVIMKPAKLIDKTGTSASSVIPVVGLSDHRLQSGCGVQAYNKKGTASGRIAKDQSPKTTNRDASTSSSDKKASSSSKTTKSTQSQPRSQQFPGSVKNSGSVSPRLQQAKLELEKRLRPPTPPSDSNKPRRQYGKQATESVSRGRKLRHKVPNTQHSDDQLSEISNESRSLSCQGDEMSQKSDSIADNLNIDMKVTSSLRSARIINQSPSLKASEQLVSGSMHKKSTLRLDENESIAELATDGPDHPSPVSVLDGSEYTDDVPSPVKHISNAPKVAGNAEESKETNSEDQWNPADSFSFNSTGTGEINCKKLQSIDHLVQKLRRLNSSHDESRIDYIASLCENSNPDHRYISEILLASGLLLRDLSSELLTFQNHSSSHPINPELFLVLEQTKASSSLSKEETFPGKVAYTKPNSEKFHRRLIFDAVNEILGAKLGSCPEPWLKSNGVSKKTLSAQKLLKELCLEIEKMQGKKQEMSIEDEGDGLKSMLWEDMMHGSESFWTKFYGEIPLVVLDVERLIFKDLVDEILIGEAASLRVKSSSRRKLFAK 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1443 1124 MobiDBLite consensus disorder prediction 77 133 - -
Lal19g1443 1124 Pfam DUF761-associated sequence motif 355 379 IPR032795 -
Lal19g1443 1124 Coils Coil 1035 1055 - -
Lal19g1443 1124 MobiDBLite consensus disorder prediction 717 732 - -
Lal19g1443 1124 PANTHER LONGIFOLIA PROTEIN 1 1123 - -
Lal19g1443 1124 PANTHER LONGIFOLIA PROTEIN 1 1123 IPR033334 GO:0051513
Lal19g1443 1124 MobiDBLite consensus disorder prediction 95 133 - -
Lal19g1443 1124 MobiDBLite consensus disorder prediction 815 873 - -
Lal19g1443 1124 Pfam Domain of unknown function (DUF4378) 923 1102 IPR025486 -
Lal19g1443 1124 MobiDBLite consensus disorder prediction 306 364 - -
Lal19g1443 1124 MobiDBLite consensus disorder prediction 454 468 - -
Lal19g1443 1124 MobiDBLite consensus disorder prediction 383 423 - -
Lal19g1443 1124 MobiDBLite consensus disorder prediction 336 364 - -
Lal19g1443 1124 MobiDBLite consensus disorder prediction 383 480 - -
Lal19g1443 1124 MobiDBLite consensus disorder prediction 628 682 - -
Lal19g1443 1124 MobiDBLite consensus disorder prediction 733 761 - -
Lal19g1443 1124 MobiDBLite consensus disorder prediction 622 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1443 Lal-Chr19 17053486 17059761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1443 167 1123 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 44.925 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1443 - - gmx:100787391 1304.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1443 19 17053486 17059761 Lal19g1443 19 17053486 17059761 ECH
Lal14g1884 14 18297363 18302550 Lal19g1443 19 17053486 17059761 LSH