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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lal19g1435
ATGCCTTATCTCAATGTTTTATTCGGTGGTTCAACTACAGTTCAAGATTCTGCAGAAATGGCAAAAAAGTCAAATGTCATTTATGATATGTTTGACCTTGATGATCATGCATGTTTTTGCATGGATTCTTCTTCCGCTGCAGTTAGGTTTTCAAGTTCAATTCCTCACACGTTGGTGCCGCTGCGTCTCAAATCCGAATCAGAGGTTGAACTTGTTTTAAGACATCACGTAGCAGAATGTCTGGAAGGTGTTGTTGTACCTGAGCCAGTTGCAGCTGCGTCAATTCCCGGTGAGCCAATGGACATACTGACTGCCTTACAGCTTGTGCTGAGAAAATCACTGGCTTATGGTGGCCTTGCTCGAGGGCTTCATGAAGCTGCTAAAGTGATTGAGAAGCATGCGGCGCAGCTCTGTGTTCTAGCCGAAGATTGTGACCAACCTGACTATGTTAAACTCGTCAAAGCCCTTTGTGCAGAGCACAATGTTAGCCTGCTGACAGTTCCAAGTGCAAAGACCCTTGGAGAGTGGGCTGGTTTGTGTAAGATTGATTCAGAAGGAAAAGCTAGGAAGGTAACTGGATGCTCCTGTGTGGTTGTCAAGGATTTCGGGGAGGAACACGAAGCCTATAATGTTGTTCTGCAGCATTTAAAATTACATACTTTTTGGCATGATATCCCTGTGGTAAATGTGAAATTAGCAGATATGAACGTGATTTTCAACCAGAAGATGGATGGATGCGTTCACCAAGGGGAGGAAGAAAAGGAAAAGCCAAAATTTGGTCCGACTTTTACAGCCCAATTTATTGGACTTTAA
813
0.4367
MPYLNVLFGGSTTVQDSAEMAKKSNVIYDMFDLDDHACFCMDSSSAAVRFSSSIPHTLVPLRLKSESEVELVLRHHVAECLEGVVVPEPVAAASIPGEPMDILTALQLVLRKSLAYGGLARGLHEAAKVIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHLKLHTFWHDIPVVNVKLADMNVIFNQKMDGCVHQGEEEKEKPKFGPTFTAQFIGL
270
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lal19g1435
270
SUPERFAMILY
L30e-like
99
215
IPR029064
-
Lal19g1435
270
PRINTS
Ribosomal protein S12E family signature
109
122
IPR000530
GO:0003735|GO:0005840|GO:0006412
Lal19g1435
270
PRINTS
Ribosomal protein S12E family signature
123
139
IPR000530
GO:0003735|GO:0005840|GO:0006412
Lal19g1435
270
PRINTS
Ribosomal protein S12E family signature
164
185
IPR000530
GO:0003735|GO:0005840|GO:0006412
Lal19g1435
270
PRINTS
Ribosomal protein S12E family signature
189
202
IPR000530
GO:0003735|GO:0005840|GO:0006412
Lal19g1435
270
Pfam
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
105
198
IPR004038
-
Lal19g1435
270
PANTHER
40S RIBOSOMAL PROTEIN S12
82
218
IPR000530
GO:0003735|GO:0005840|GO:0006412
Lal19g1435
270
PANTHER
40S RIBOSOMAL PROTEIN S12
82
218
-
-
Lal19g1435
270
ProSitePatterns
Ribosomal protein S12e signature.
105
123
IPR000530
GO:0003735|GO:0005840|GO:0006412
Lal19g1435
270
Gene3D
-
88
218
IPR029064
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lal19g1435
Lal-Chr19
17005798
17008655
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lal19g1435
95
216
Cytoplasmic Ribosomal Protein Gene Family
AT2G32060
76.230
4.09e-64
196
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lal19g1435
K02951
-
gmx:100786733
253.832
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