Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1425 ATGGGGTGTTCATTTTCTGGTTTAAATGCGTTATCCGACACCGTTAACGGCGGAGCTGACGTGTGGATAAACAACAACCGTTTCCGCGTGGTGAAGCAACTCGGTGAAGGTGTCTCCGTTTATTTCTTCGTCGTGAAAGAGATTCTCTCTGATTCAGCTTCCTCTGCCTTCGCTTCCAATCTCAATTACTCCTCTCATCGTTCCGATGACGGAACTTATGCTATGAAAAAGGTCCTCATTCAGAACAATGAACAGCTGGAGTTGGTCAAGGAGGAGATACGTGTTTCATCGCTGTTCGATCACCCAAATCTGCTCCCTCTTCTTGATCATGCAATCATTTCTGTTAAGCCTACCCAAGAAAAATCTTGGACCAATGAGGCATATTTGTTATTTCCAGTTCATTTGGATGGAACATTGCTGGACATTGCCAAAACAATGAAAGCCAAGAAGGAGTTCTATTCCACCTCAGATGTTCTTCAAATATTTCGCCAGCTTTGTGCCGGACTGAAGCATATGCACAACTTAGATCCTCCATATGCTCATAATGATGTCAAACCTGGGAATGTTCTGATATCACATAGAAAAGGACAACCACCTCTTGCCATACTGATGGATTTTGGTAGTGCTCTTCCTGCCAGGAAGCAAATTAGATCCAGACAGGAGGCCCTCCAGTTGCAGGAATGGGCATCTGAACATTGCTCTGCTCCTTTCCGAGCTCCTGAACTGTGGGATTGCCCAAGCCATGCTGATATAGATGAGAGGACTGACATTTGGTCGCTAGGATGCACATTGTTTGCGATAATGTATGGGGTATCACCATTTGAATATGCACTTGAAGAATCTGATGGAAACCTGCAATCGGCTATCGTAAATGCTCAGATCAAATGGCCAGCTGAACCTAAGCCCTCATATCCTGATGCTCTTCATAAGTTTGTGTCATGGATGCTTCAACCACAGGCTGCTGTTCGGCCCCATATAGACGATATCATTATCCATGTTGATAAGTTGATTGCAAAGTTCTCTCAGTGA 1029 0.4451 MGCSFSGLNALSDTVNGGADVWINNNRFRVVKQLGEGVSVYFFVVKEILSDSASSAFASNLNYSSHRSDDGTYAMKKVLIQNNEQLELVKEEIRVSSLFDHPNLLPLLDHAIISVKPTQEKSWTNEAYLLFPVHLDGTLLDIAKTMKAKKEFYSTSDVLQIFRQLCAGLKHMHNLDPPYAHNDVKPGNVLISHRKGQPPLAILMDFGSALPARKQIRSRQEALQLQEWASEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTLFAIMYGVSPFEYALEESDGNLQSAIVNAQIKWPAEPKPSYPDALHKFVSWMLQPQAAVRPHIDDIIIHVDKLIAKFSQ 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1425 342 Pfam Protein kinase domain 66 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1425 342 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 341 - -
Lal19g1425 342 ProSiteProfiles Protein kinase domain profile. 28 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1425 342 Gene3D Phosphorylase Kinase; domain 1 10 132 - -
Lal19g1425 342 PANTHER PHOSPHORYLASE KINASE, GAMMA CATALYTIC SUBUNIT-RELATED 1 341 - -
Lal19g1425 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Lal19g1425 342 SUPERFAMILY Protein kinase-like (PK-like) 23 332 IPR011009 -
Lal19g1425 342 Gene3D Transferase(Phosphotransferase) domain 1 135 340 - -
Lal19g1425 342 SMART serkin_6 28 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1425 Lal-Chr19 16939301 16943099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1425 72 332 EF-hand Containing Proteins AT4G04710 26.394 7.79e-13 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Lal19g1425 Pkinase 7.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1425 K08856 - gmx:100803659 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1425 19 16939301 16943099 Lal19g1425 19 16939301 16943099 ECH
Lal7g1330 7 18539561 18543021 Lal19g1425 19 16939301 16943099 LSH