Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1424 ATGGGTGGGAGCGATAGCGAGGTAGAGAAGACGGCGCAGAAAGAGAAAGAGAAGAAGAAGGTTCTTGCATTGGCACCTATTGCAAAACCCCTCGCTGGGAAAAAGTTATCAAAGCGAACTCTTAAGCTTGTTCGTAAAGCTGCTGAACACAAATGCTTAAAGAGGGGAGTCAAAGAGGTCGTTAAAAGCATAAGGCGTGGTCATAAAGGGTTATGTGTTATAGCTGGGAACATATCACCCATTGATGTCATCACTCATGTTCCTATTCTGTGTGAAGAATCTGACATTCCTTATGTTTATGTCCACTCTAAAGAAGGAAAGGAAAACATGGACTCTTTCGTAGACCTTGCAACTGCAGGAGCAACAAAGAGACCTACTTGCTGTGTTTTGGTGATGACCAAGCCTGCAAAGGGTGAACTAGATCAAGGGGAACAAGAGAAACTGAAGTCAGATTATGATCAAGTTGCAGCTGAAATTACTGAGATTACAGCTTCTCTCTTTTGA 504 0.4286 MGGSDSEVEKTAQKEKEKKKVLALAPIAKPLAGKKLSKRTLKLVRKAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYVYVHSKEGKENMDSFVDLATAGATKRPTCCVLVMTKPAKGELDQGEQEKLKSDYDQVAAEITEITASLF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1424 167 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 2-LIKE PROTEIN 3 165 - -
Lal19g1424 167 PRINTS High mobility group-like nuclear protein signature 26 39 IPR002415 GO:0003723|GO:0005730
Lal19g1424 167 PRINTS High mobility group-like nuclear protein signature 39 54 IPR002415 GO:0003723|GO:0005730
Lal19g1424 167 PRINTS High mobility group-like nuclear protein signature 56 66 IPR002415 GO:0003723|GO:0005730
Lal19g1424 167 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 41 125 IPR004038 -
Lal19g1424 167 SUPERFAMILY L30e-like 19 136 IPR029064 -
Lal19g1424 167 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 3 165 - -
Lal19g1424 167 PRINTS Ribosomal protein L7A/RS6 family signature 53 67 IPR018492 -
Lal19g1424 167 PRINTS Ribosomal protein L7A/RS6 family signature 72 85 IPR018492 -
Lal19g1424 167 PRINTS Ribosomal protein L7A/RS6 family signature 88 98 IPR018492 -
Lal19g1424 167 Gene3D - 8 162 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1424 Lal-Chr19 16934089 16935711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1424 46 121 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 32.911 6.70e-06 43.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1424 19 16934089 16935711 Lal19g1424 19 16934089 16935711 ECH