Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1420 ATGGGTGGTGGAAGGAAGAGGAGGCATCACTTTGGAAAAATCCATTCATTCGCGCGTGGGAAAGCTACTTTGAGAGATGAAGAACATTCACTTATAGGAGGCCCTGGCTTCTCAAGGAGAGTATATATCAATGACCCTGAAAGGTTTGAGTCAAATCTTCTGAATTATGGTGATAATTATGTCAAGACTACTAAATATACACTAGCCACTTTTATTCCCAAGTCCTTGTTTGAACAATTCAGGAGGGTTGCCAATTTCTACTTCCTTGTGGTAGCAATTTTGTCCTTCTTACCTGTTTCACCATACTCAGCTGTTAGTAATGTTGTTCCTCTTGTAATTGTGGTTGCTGCTTCCATGGGCAAAGAGTTACTTGAAGATTGGAAGCGAAAAACACAGGATATAGAGATCAATAACAGAACGGTTAAAGTACATCGCGGAGGTGGTGTTTTTGACCAGTCTAAATGGAGGGATTTGAGAGTTGGAGACATAGTTAAGGTGGGGAAAGATCAATTTTTCCCTGCTGATCTTATCTTACTTTCATCAAGTTATGACGATGCGATTTGCTATGTTGAGACCATGAATCTTGATGGAGAAACAAATCTTAAACTGAAACAAGCAATGGAAGGAACTTCAAAATTTCAAGAAGACTCAAGCTTTGGAAATTTTAAGGCTATCATCAAATGTGAAGATCCGAATGCAAATTTGTATGCTTTTGTAGGAAGTCTGGACCACGAGGATCAGCAACAGCCTCTTGCGCCTCAGCAGCTACTGCTTAGGGACTCGAAGCTAAGGAATACAGATTTTATCTTCGGCGCGGTAATCTTTAGTGGTCATGATACTAAGGTTATGCAGAACTCAACAGAGCCTCCATCCAAGAGAAGCAAAATTGAGAAACGGATGGATAAGGTTATCTACTGCTTGTTCTTTCTCTTATTTCTGATTTCCTTTATTGGTTCCATATTCTTTGGGATTTCAACAAAGGATGATCTTGAAAATGGAAAAATGAAGAGATGGTATCTTAGACCAGATGATTCAACAATTTACTATGACCCAAAGAACGCGGCAGTTGCAGCACTTCTGCATTTCTTGACAGCGGTGATGTTGTATGGTTATTTCATTCCAATTTCATTGTATGTCTCAATTGAAATTGTGAAAGTTCTTCAAAGCATTTTCATCAACGGGGATATCCACATGTATTATGCGGAAACTGATCAGCCAGCGCATGCTCGTACGTCAAATTTGAATGAAGAACTTGGGCAAGTTGAGACCATACTTTCAGATAAAACAGGAACTTTGACTTGCAATTCTATGGAATTTATCAAATGTTCTATTGCTGGCGTGTCTTATGGAAGAGTGGCTACAGAAGTTGAGAGAGCTCTATCCGGGAGAACAGATTCATCTTTTGGTCAAAAGTTGAAAGGAGGCAACAACGTTGCAGTGCCAACTATTAAAGGGTTTAACTTTCAGGATGAAAGGATCATGAATGGAAATTGGGTCAAAGAACCCAATAGCAATGTAATCCAGAACTTCCTACGGTTGTTGGCTGTATGCCATACTGCAGTACCTGAAGTTGATGAGAAAACTGGTAAAATCTCATATGAAGCTGAATCGCCGGATGAGGCAGCTTTTGTGATTGCAGCCAGAGAACTCGGATTTGAGTTTTATGAAAGGACGCATTCGACTACTTCATTTCGTGAATTAGATCTAAAATCTGCCAAGAAAGCTCAAAGGTCCTACAAACTTTTAAATATACTAGAGTTTAGTAGTGCAAGAAAGCGTATGTCTGTAATTGTAAGAGACGAGGAGGGGAAACTACTACTACTTAGCAAAGGCGCTGACAGTGTCATGTTTGAACGCCTAGCAAAGAATGGAAGGGAATTTGAAGAAAAGACTAAGCAGCACATTAGTGAATATGCTGATTCTGGTCTGAGGACTTTAATACTTGCATATCGTGAACTTGATGAGGAAGAGTACAGTCAATTTAATAAAGAATTCACAGAGGCCAAAAACTCAGTGAGTGCAGATCAGGAGCGGATTGTAGAGGAAATATCTCAAAATATTGAGAAGGACTTGATTCTTCTTGGTGCTACTGCTGTTGAAGACAAACTTCAAAATGGGGTTCCTGAATGCATTGACAAACTAGCACAGGCTGGGATTAAGCTATGGGTTTTGACTGGTGATAAAATGGAGACAGCAATCAATATTGGATTTGCTTGTAGTTTACTCAGACAAGGAATGAAACAGATTATAATCAGCTCAGACACTCCAGAAATCAAATCTCTGGAGAACATGGAGGACAAGTCTGCTTCTGAAGCGGCACTCAAGGCAAGTGTTCTTCGTCAAATAAAAGACGGAAAGGCATTACTTTCTACATCGGATGAAAACTCTGATGCACTAGCTCTAATTATTGATGGGAAGTCTCTTACTTATGCACTGGAAGATGATGTCAAAGACTTGTTTCTTGAACTTGCTGTTGGCTGTGCATCTGTTATATGCTGCCGTTCATCTCCCAAGCAAAAAGCACTTGTTACTAGACTGGTTAAGATCAAAACTGGTAAGACAACTCTAGCGATTGGAGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGGATTGGTATCAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCAAGTGATATTGCAATTGCCCAATTTCGGTTTCTAGAGCGCCTACTTCTCGTGCATGGACATTGGTGCTACAGAAGGATCTCATCAATGATCTGCTACTTCTTCTATAAGAACATTGCCTTCGGCTTCACTCTATTCTTCTATGAGATGTATGCCTCATTCTCAGGGCAACCTGCATACAATGATTGGTGCATGTCACTATATAATGTATTCTTCACTTCGCTTCCCGTAATTGCTTTGGGAGTGTTTGATCAAGATGTCTCTTCTAAATTATGCCTCAAGTTTCCTCTATTATATCAAGAAGGTATGAAAAATGTCCTATTTAGCTGGAAAAGAATATTTGGTTGGGCATTCAATGGTGTTGTTAGTGCTGCAATTATATTCTTCTTTTGCATTCGCACGATGGAGCATCAGGCATTCCGTAAAGGCGGAGAAGTTGTCGGGCTTGAAGTTCTTGGTACTACCATGTACACTTGTGTTGTGTGGGTGGTGAATTGTCAAATGGCATTATCTATCAGTTACTTCACTTACATACAACATATTTTCATCTGGGGAAGCATTCTATTCTGGTACATATTCCTCATGATATATGGAATCATTGATCCATCCTTTTCAACCACTGCTTATGAGGTCTTCATTGAAGCTCTTGCACCAGCACCATCTTTCTGGTTCATCACTTTATTTGTTGTTATTGCTTCTCTTCTTCCATATTTCGCCTACGCTTCCGTCCAATTCCGATTCTTCCCTGTCTATCATCAAATGATACAATGGATAAGAAATGATGGGCAAACAAATGATCCAGAATTCTGTAATGTGGTGAGACAGAGATCAATTAGACACACAACAGTTGGATTCACAGCACGTTTGGAAGCATCCAGGCGTTTTGAAGCATCCAAAGGATTTGAAGCACCTTTTGAAGTCACCTCTGATATCAGATAA 3600 0.4 MGGGRKRRHHFGKIHSFARGKATLRDEEHSLIGGPGFSRRVYINDPERFESNLLNYGDNYVKTTKYTLATFIPKSLFEQFRRVANFYFLVVAILSFLPVSPYSAVSNVVPLVIVVAASMGKELLEDWKRKTQDIEINNRTVKVHRGGGVFDQSKWRDLRVGDIVKVGKDQFFPADLILLSSSYDDAICYVETMNLDGETNLKLKQAMEGTSKFQEDSSFGNFKAIIKCEDPNANLYAFVGSLDHEDQQQPLAPQQLLLRDSKLRNTDFIFGAVIFSGHDTKVMQNSTEPPSKRSKIEKRMDKVIYCLFFLLFLISFIGSIFFGISTKDDLENGKMKRWYLRPDDSTIYYDPKNAAVAALLHFLTAVMLYGYFIPISLYVSIEIVKVLQSIFINGDIHMYYAETDQPAHARTSNLNEELGQVETILSDKTGTLTCNSMEFIKCSIAGVSYGRVATEVERALSGRTDSSFGQKLKGGNNVAVPTIKGFNFQDERIMNGNWVKEPNSNVIQNFLRLLAVCHTAVPEVDEKTGKISYEAESPDEAAFVIAARELGFEFYERTHSTTSFRELDLKSAKKAQRSYKLLNILEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERLAKNGREFEEKTKQHISEYADSGLRTLILAYRELDEEEYSQFNKEFTEAKNSVSADQERIVEEISQNIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPEIKSLENMEDKSASEAALKASVLRQIKDGKALLSTSDENSDALALIIDGKSLTYALEDDVKDLFLELAVGCASVICCRSSPKQKALVTRLVKIKTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEMYASFSGQPAYNDWCMSLYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGMKNVLFSWKRIFGWAFNGVVSAAIIFFFCIRTMEHQAFRKGGEVVGLEVLGTTMYTCVVWVVNCQMALSISYFTYIQHIFIWGSILFWYIFLMIYGIIDPSFSTTAYEVFIEALAPAPSFWFITLFVVIASLLPYFAYASVQFRFFPVYHQMIQWIRNDGQTNDPEFCNVVRQRSIRHTTVGFTARLEASRRFEASKGFEAPFEVTSDIR 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1420 1199 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Lal19g1420 1199 Gene3D - 694 898 IPR023214 -
Lal19g1420 1199 CDD P-type_ATPase_APLT_Dnf-like 58 1018 - -
Lal19g1420 1199 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 432 696 IPR023299 GO:0000166
Lal19g1420 1199 SFLD C1.7: P-type atpase like 407 909 - -
Lal19g1420 1199 SUPERFAMILY Calcium ATPase, transmembrane domain M 47 1136 IPR023298 -
Lal19g1420 1199 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1181 - -
Lal19g1420 1199 SUPERFAMILY HAD-like 420 913 IPR036412 -
Lal19g1420 1199 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Lal19g1420 1199 SFLD p-type atpase 407 909 IPR044492 -
Lal19g1420 1199 SUPERFAMILY Calcium ATPase, transduction domain A 138 285 IPR008250 -
Lal19g1420 1199 Gene3D - 534 693 IPR023299 GO:0000166
Lal19g1420 1199 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1181 - -
Lal19g1420 1199 Pfam Phospholipid-translocating P-type ATPase C-terminal 886 1136 IPR032630 -
Lal19g1420 1199 Pfam Cation transport ATPase (P-type) 517 620 - -
Lal19g1420 1199 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 825 940 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal19g1420 1199 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Lal19g1420 1199 PRINTS P-type cation-transporting ATPase superfamily signature 744 754 - -
Lal19g1420 1199 PRINTS P-type cation-transporting ATPase superfamily signature 858 877 - -
Lal19g1420 1199 Gene3D - 121 287 - -
Lal19g1420 1199 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 56 1143 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1420 Lal-Chr19 16910244 16916467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1420 10 1184 Primary Pumps ATPases AT3G25610 70.059 0.0 1764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1420 K01530 K14802 gmx:100799312 2006.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1420 19 16910244 16916467 Lal7g1320 7 18497675 18503502 ECH
Lal19g1420 19 16910244 16916467 Lal19g1420 19 16910244 16916467 ECH
Lal7g1320 7 18497675 18503502 Lal19g1420 19 16910244 16916467 LSH