Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1407 ATGGCAACTCGGATTATTCTCCTCTTCCTTTCACTTCTTCAACTCAGTTCCCGACTCAACTCGGAGCCAACTCAGGACAAACAAGCCCTCCTCGCTTTCATTTCCCAAACACCACACTCTTACCGTCTCAAATGGAACGTTTCTGACTCCGTTTGTAACTGGGTCGGAGTCCAATGCGATTCAACCACTTCCTACGTTTATTCACTCCGTTTACCCGGTGTTGGTCTCATGGGTCGGGTCCCACCCGATACCATTGGTCGTCTCACTCAGCTTCGAATTCTCAGTCTCCGTTCTAACGCTCTCACTGGTCAGGTTCCTTCCGATTTCTCAAACCTCATATTCCTTCGTAGCATCTATCTTCAAAATAATCACTTTTCCGGTGAGTTTCCACTGAGTCTGACTCGACTCACTCGTTTAAATCGCTTGGTTCTTTCCTCTAACAACTTCAACGGCACAATCCCTTTCTCTATAAACAGTTTAACTCGTCTCACTGGTCTTTTCTTAGAGAACAACACCTTCTCCGGTAAACTACCAAGCATTACTACTAAATTGGTTGACTTTGATGTTTCCAATAACCGTTTAAACGGTTCCATTCCTGAATCTCTATCGAAATTCCCTGCGTCTTCTTTTGATGGAAATTTAGATCTCTGTGGTGGACCTTTAAAGCCATGTAAACAATTTTTTCCATCACCGGCGCCGTCACCGGAGGCAACAGTTCCGTCGAGCCTGGTGCAAAAGAACTCTAAGAAGCTTTCCACTGGTGCCATTGTCGGAATTGTCGTAGGTTGTGTTGCCGGTGCCTTGTTATTGCTCCTGCTTCTGTTATTTTGTTTATGGAAACGGAAGCGCCGGCAACCGTCGAAGTCGCCAAAGCCAGTGACAACCGCGACGCGTAATGTCCCTACGGCGGAGGCAGGAACGTCGTCTTCTAAGGATGATATAACGGGTGGTTCAATGGAAAGTGAGAGGAACAAGCTGGTGTTTTTGGAAGGAGGGATATACAATTTCGACTTGGAGGATCTGCTTCGTGCCTCGGCGGAGGTATTAGGGAAAGGGAGCGTGGGGACTTCATATAAGGCGGTGTTAGAGGAAGGAACGACGGTGGTGGTGAAGCGGTTGAAGGATGTGGTGGTTACGAAGAAAGAGTTCGAGATGCAAATGAAAATGGTAGGGAAGATTAAACATGAGAATTTGGTTCCTCTTAGAGCTTTCTACTTTTCCAAAGATGAAAAATTGCTTGTTTATGATTACATCACTTCTGGTAGCCTCTCTGCTCTTCTTCACGGGAGCAGAGGGTCTGGGAGAACACCATTAGGTTGGGAAAACAGAAAGAGAATAGCATTAGGGACCGCAAGAGGGGTTGCATGCCTCCACGTGTCAGGCAAGGTGGTCCATGGCAACATCAAATCTTCAAATATACTCCTCCGGGGACCTGACAACAACGCAAGTGTTTCGGATTTTGGGCTGAACCCATTGTTTGGCAATGGAGGCCCATCGAACCGCATTGCAGGTTATCGTGCCCCGGAGGTATTAGAGACTCGTAAGATGACTTTCAAGTCTGATGTATACAGCTTTGGAGTGTTGGTGTTGGAGTTATTAACTGGTAAGGCACCAAATCAAGCATCACTGGGTGAAGAGGGGATTGACCTTCCAAGGTGGGTCCAGTCAGTGGTTCGTGAGGAATGGACGGCTGAGGTGTTCGACGCTGAGCTCATGAGGTTTCACAACATAGAGGAAGAAATGGTTCAGCTGTTGCAGATTGCAATGAGTTGTGTTTCGGTGGTGCCTGATCAGAGGCCAAGTATGCAAGAGGTGGTGCACATGATTGAGGGCATGAATAGGGATGATGGTTTGAGACAGTCCTCTGATGACCCTTCTAAAGGTTCTGAGGGTGAGTCAAGGACACCACCTAGGTCCACACCTTAA 1926 0.4735 MATRIILLFLSLLQLSSRLNSEPTQDKQALLAFISQTPHSYRLKWNVSDSVCNWVGVQCDSTTSYVYSLRLPGVGLMGRVPPDTIGRLTQLRILSLRSNALTGQVPSDFSNLIFLRSIYLQNNHFSGEFPLSLTRLTRLNRLVLSSNNFNGTIPFSINSLTRLTGLFLENNTFSGKLPSITTKLVDFDVSNNRLNGSIPESLSKFPASSFDGNLDLCGGPLKPCKQFFPSPAPSPEATVPSSLVQKNSKKLSTGAIVGIVVGCVAGALLLLLLLLFCLWKRKRRQPSKSPKPVTTATRNVPTAEAGTSSSKDDITGGSMESERNKLVFLEGGIYNFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFEMQMKMVGKIKHENLVPLRAFYFSKDEKLLVYDYITSGSLSALLHGSRGSGRTPLGWENRKRIALGTARGVACLHVSGKVVHGNIKSSNILLRGPDNNASVSDFGLNPLFGNGGPSNRIAGYRAPEVLETRKMTFKSDVYSFGVLVLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMSCVSVVPDQRPSMQEVVHMIEGMNRDDGLRQSSDDPSKGSEGESRTPPRSTP 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1407 641 MobiDBLite consensus disorder prediction 285 318 - -
Lal19g1407 641 PANTHER OS05G0480400 PROTEIN 8 627 - -
Lal19g1407 641 MobiDBLite consensus disorder prediction 289 315 - -
Lal19g1407 641 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Lal19g1407 641 Gene3D Ribonuclease Inhibitor 183 224 IPR032675 -
Lal19g1407 641 SUPERFAMILY L domain-like 25 205 - -
Lal19g1407 641 MobiDBLite consensus disorder prediction 611 631 - -
Lal19g1407 641 Pfam Protein kinase domain 346 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1407 641 MobiDBLite consensus disorder prediction 611 641 - -
Lal19g1407 641 Gene3D Phosphorylase Kinase; domain 1 311 417 - -
Lal19g1407 641 CDD STKc_IRAK 349 612 - -
Lal19g1407 641 Gene3D Ribonuclease Inhibitor 23 182 IPR032675 -
Lal19g1407 641 PANTHER OS05G0588300 PROTEIN 8 627 - -
Lal19g1407 641 Gene3D Transferase(Phosphotransferase) domain 1 418 629 - -
Lal19g1407 641 ProSiteProfiles Protein kinase domain profile. 343 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1407 641 SUPERFAMILY Protein kinase-like (PK-like) 347 611 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1407 Lal-Chr19 16784502 16787279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1407 26 627 Receptor kinase-like Gene Family AT5G58300 52.855 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal19g1407 Pkinase 2.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1407 - - gmx:100806857 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1407 19 16784502 16787279 Lal19g1407 19 16784502 16787279 ECH
Lal14g1852 14 18091203 18094139 Lal19g1407 19 16784502 16787279 LSH
Lal7g1294 7 18323178 18326611 Lal19g1407 19 16784502 16787279 LSH