Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1398 ATGGCCACCGCCATATATGAACGTGAAGCCGATTATGACAGCAGCTCCTCCTCCATCACCGTGCCGGAATCAAGCCGGAGCTGGATGAGCAACCTCAGTTTCAGCAGCCGCCGCCGCCGGAGCTCAGTCTCCGTGTGTTCCTCCACCATGGACACCAACAACAAGCCACACAAGGCAAACCAAGTTGCATGGGAGGCCATGCAGCGGCTCCGCCTCGACAAGGGCCACCTTGGACTGGACCACTTCCGCCTCCTTCGGCGGCTGGGTAGCGGCGACATAGGGAATGTTTACCTTTGTCAAATAAGGAACCCTGTGGTAGGGTTACCACAGTGCTTCTATGCCATGAAAGTGGTGGATAGAGAAGCACTTGCTATAAGGAATAAGTTGCATAGAGCTGAGATGGAGAAAGAGATTTTGGGTATGCTTGATCATCCTTTCTTGCCAACTTTGTACACTGAGTTTGATGCTTCTCATTACTCTTGTTTCCTCATGGAGTTCTGTCCCGGTGGTGATTTATATGCTGCTCGCCACCGCCAACCAGGGAAGCGCTTTACCATTGCATCCGCTAAGTTTTATGCGGCTGAGACACTATTGGCCTTGGAGTATCTCCACATGATGGGCATAGTGTACAGGGATTTGAAGCCAGAGAATGTGCTGGTAAGGGAGGATGGTCACATTATGCTTTCAGATTTTGATCTTTCTCTCAAATGTGACGTTGTTCCAAAGCTACTAAGGAGTAAAACCAGGTCAGAGGGAAGTATCAAGAGCATAAAGAGATCTACACCTTCCTGCACTGCTCCCATGCAGCCTGTGATATCATGTCTTTTAGGCAAGAAAAAGAAACCAACTGTGACAACAGTTATAGTAGAAAATGTTGCTATTGAAGACCAAGAACTTGATCCAGAGCTGGTTGCTGAGCCTATTGATGCTAGGTCCAAGTCATTTGTAGGGACACATGAGTACTTGGCACCAGAAGTGATTTTGGGACAAGGACATGGGAGTGCAGTGGATTGGTGGACATTTGGTGTGTTCTTGTATGAAATGTTAAATGGAAGAACACCATTCAAAGGTGAAAATAATGAGAAAACACTGATAAACATTCTCAAGCAGCCATTGGCTTTTCCTAGAATAGCAGTAAGTAGCAGCAAGGAGTATGAAGAGATGGTGAAAGTTCAAGACCTTATAAGCAAGCTGTTAGTGAAGAATCCAAATAAGAGAATTGGTAGCTGCATGGGTTCTGTTGAGATCAAAAGGCATGAGTTCTTCAAAGGTGTAAATTGGGCTTTAATTAGATCAGTTAGGCCCCCTGAGGTCCCTAATGATCTGAACAAGATTAGAACTAGTAGGGTTTTGATACCAAAACTAAGCAAAAAAGATAGGGATCAACCATTTCAGCTTACTCATAGTTTTGAATACTTCTAA 1422 0.4543 MATAIYEREADYDSSSSSITVPESSRSWMSNLSFSSRRRRSSVSVCSSTMDTNNKPHKANQVAWEAMQRLRLDKGHLGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRNKLHRAEMEKEILGMLDHPFLPTLYTEFDASHYSCFLMEFCPGGDLYAARHRQPGKRFTIASAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRSEGSIKSIKRSTPSCTAPMQPVISCLLGKKKKPTVTTVIVENVAIEDQELDPELVAEPIDARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLNGRTPFKGENNEKTLINILKQPLAFPRIAVSSSKEYEEMVKVQDLISKLLVKNPNKRIGSCMGSVEIKRHEFFKGVNWALIRSVRPPEVPNDLNKIRTSRVLIPKLSKKDRDQPFQLTHSFEYF 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1398 473 Gene3D Transferase(Phosphotransferase) domain 1 171 440 - -
Lal19g1398 473 Gene3D Phosphorylase Kinase; domain 1 82 170 - -
Lal19g1398 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Lal19g1398 473 ProSiteProfiles Protein kinase domain profile. 82 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1398 473 SMART serkin_6 82 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1398 473 Pfam Protein kinase domain 83 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1398 473 Pfam Protein kinase domain 312 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1398 473 SUPERFAMILY Protein kinase-like (PK-like) 62 443 IPR011009 -
Lal19g1398 473 CDD STKc_phototropin_like 80 439 - -
Lal19g1398 473 PANTHER FLIPPASE KINASE 1-RELATED 1 473 - -
Lal19g1398 473 PANTHER PROTEIN KINASE PINOID 2 1 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1398 Lal-Chr19 16701368 16703452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1398 7 473 AGC Kinase Gene Family AT2G26700 59.160 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lal19g1398 Pkinase 4.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1398 K08286 - gmx:100777988 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1398 19 16701368 16703452 Lal19g1398 19 16701368 16703452 ECH