Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1374 ATGGCAAGAAACATGAATAATACATTTGTTGTTCTTTTCATTGCATTAGCCACTCTTCTCCATGGCTCATCTGCTCAAACCAGACACGTGGTTGGTGATTCAATTGGCTGGACCATCCCTTCTGGTGGTGCTGCCACATACACCACTTGGGCTTCCAACAAAACCTTCACTCTTGGAGACACTCTTGTGTTTAACTTTGCTAATGGACAACATGATGTTGCAAAGGTTACAAAATCTGAGTTTGATGCGTGTAATGGAGGAAATGCTATTTTCACCATCACCACAAATCCTGCAATTGTATCCCTTAATGAGACAGGGGACCAATATTATATATGTGCCTTTACTGGACACTGTTCTGCTGGTCAGAAATTGACAATTAAGGTTACTCAAAAAACTTCTTCTCTTGCACCAAACACTAGTCCTAGTGCTTCTCCTTCACCCAAGACTAGTCCTAGTGCTTCTCCTTCACCCAAGATTAGTCCTGTTGCTGCACCTTCCCCTCAACATAGAAGTGATATTTCACCATCGGCTGCAGTTCCAGAATCTGCACCAGCTCCAGCACCATTCAATGGACCAGTGACTTACACGGTTGGAGACACCATAGGGTGGACCATACCTACCGGTGGTGCTTCTGCTTATGTATCATGGGCTTCTGCTAAGAACTTCAAGGTTGGAGACATTCTAGTGTTCAACTACCAAATAAACACACACAACGTAGAGGAAGTGACAAAGGAGAAGTATGATTCATGCAGCAGTGTTTCACCTATTGCTGCTTATAACAGCGCACCACCAGTGAGGGTTACTCTTAACAAATCTGGTCCTCACTACTTCATTTGTGGTTATACTGGACATTGTTCTGCTGGTCAAAAACTTGCTATCAATGTCACCGGCACCACCACCACCACTGCCACCTCTCCATCCTCCGCCGCCACTCCTTCAGGTTCTACAACCCCTTCATCCCCTTCTCCTTCAGGTGAAGGTGGTGTCAGTTCCCCTCCACAAAATTCTGGTGCTGCTTCTGTTGGATCTCTTGGATTATTTGCTATCCTGCTTTCAGTTGCTGCTGTTGCATTTTATTAG 1080 0.45 MARNMNNTFVVLFIALATLLHGSSAQTRHVVGDSIGWTIPSGGAATYTTWASNKTFTLGDTLVFNFANGQHDVAKVTKSEFDACNGGNAIFTITTNPAIVSLNETGDQYYICAFTGHCSAGQKLTIKVTQKTSSLAPNTSPSASPSPKTSPSASPSPKISPVAAPSPQHRSDISPSAAVPESAPAPAPFNGPVTYTVGDTIGWTIPTGGASAYVSWASAKNFKVGDILVFNYQINTHNVEEVTKEKYDSCSSVSPIAAYNSAPPVRVTLNKSGPHYFICGYTGHCSAGQKLAINVTGTTTTTATSPSSAATPSGSTTPSSPSPSGEGGVSSPPQNSGAASVGSLGLFAILLSVAAVAFY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1374 359 Gene3D - 193 308 IPR008972 -
Lal19g1374 359 Gene3D - 27 140 IPR008972 -
Lal19g1374 359 PANTHER PEELING CUPREDOXIN, PUTATIVE-RELATED 194 312 - -
Lal19g1374 359 PANTHER PEELING CUPREDOXIN, PUTATIVE-RELATED 5 145 - -
Lal19g1374 359 CDD Stellacyanin 27 128 - -
Lal19g1374 359 SUPERFAMILY Cupredoxins 193 296 IPR008972 -
Lal19g1374 359 MobiDBLite consensus disorder prediction 301 336 - -
Lal19g1374 359 MobiDBLite consensus disorder prediction 134 185 - -
Lal19g1374 359 ProSiteProfiles Phytocyanin domain profile. 27 130 IPR003245 GO:0009055
Lal19g1374 359 Pfam Plastocyanin-like domain 37 122 IPR003245 GO:0009055
Lal19g1374 359 Pfam Plastocyanin-like domain 203 289 IPR003245 GO:0009055
Lal19g1374 359 SUPERFAMILY Cupredoxins 27 128 IPR008972 -
Lal19g1374 359 MobiDBLite consensus disorder prediction 148 162 - -
Lal19g1374 359 PANTHER BLUE COPPER PROTEIN 5 145 IPR039391 GO:0009055
Lal19g1374 359 PANTHER BLUE COPPER PROTEIN 194 312 IPR039391 GO:0009055
Lal19g1374 359 ProSiteProfiles Phytocyanin domain profile. 193 297 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1374 Lal-Chr19 16582809 16584848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1374 195 356 Miscellaneous Gene Families AT5G20230 35.260 4.83e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1374 - - aprc:113846867 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1374 19 16582809 16584848 Lal19g1374 19 16582809 16584848 ECH
Lal7g1252 7 18043258 18044057 Lal19g1374 19 16582809 16584848 LSH