Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1373 ATGCCACGGCCAGGGCCAAGGCCTTATGAGTGTGTGAGGAGAGCTTGGCATAGTGAGCGCCATCAACCCTTGAGAGGTTCCATTGTTCAGCAGATTTTCAGGGTTGTGAATGACGCTCACAGTCCTGCAACTAAGAAGAACAAGGAATGGCAAGAGAAGCTTCCAGTTGTTGTTCTCAAAGCCGAAGAAATTATGTACTCCAAAGCAAATTCAGAGGGAGAGTATCTTAATCTTGAAACACTCTGGGAACGCCTCAACGATGCCATTAACACAATCATAAGGAGAGATGAGACCACAGAGACTGGAGACCTTTTGCCCCCATGTGTTGAAGCTGCACTTAACCTGGGTTGCAAACCTGTAAGAACTTCAAGAAGTGATCGACACAATAATCCCAGGACTTACCTTGCCCCCAGAACTCAACAACCTCCTCCTTCTGGGCCTCCTAAATCTGTTGGGGGCAATCCTATAAACTATACTACAAAATTCACAAGTTCCACTGTTTCTGGAATTCATGTATCAGATTCTAACCAGTATGCCCACCAAAATAGTAGAATGATGGGTTCCTGTAACTACCCTTTCTCAGACAGTTTCCCTTCTGGTCAACAACACCATCAGCCATTGAGAGTAGAAACTAAATCCTCAATGAACATGGGTTCAGTTTACCCCTTGTACTACAGTCATGAAGCTAAAGAGCCTCAATTAAGGACGGCCAATGTAGACAATACATGTTCCGATACAATCTTTGTTGGCAGACCAGTAATGACTCCAGTCCCTGAGCCATCTGGGATTGGTCGAATGGATAACTTCTCCTATGGTAGATTCCAACATGTTCCAAACAGAATTGCAAAAGAACCTGTTTTTGGCACTCATCAGGAGCCTCCAGATAGGGAATGCGATTTATCTCTGAGGTTGGGTCAATCTTTACATCCAGGTATGAACAGAAAAGGAAGTTCGGCATATGAAATGGAAGATGCTGGATTAAGAGGTTCTCAGGATGGCAGAAAGTTGACTCATCTATCTATGCAGAAAAATAAAGAGCTCTGTTTTTACCCCAGAGAGACAGGATATGGTACTGTTGACTCTGCCAATTATACTAAATATAATGGAGAGGGTGAAGATCAGAACTTAGAGACAGCGATGCGGAAGCGCAAAGCACCTGTAGGTAACAATGAGGAGGATGGGCAATTTTGCCAGTATCTAGGGGTCCCATCCAATCAGTTTAGTGTAGAACCCAAAGGTCAGGTTCGTAGATAG 1254 0.4418 MPRPGPRPYECVRRAWHSERHQPLRGSIVQQIFRVVNDAHSPATKKNKEWQEKLPVVVLKAEEIMYSKANSEGEYLNLETLWERLNDAINTIIRRDETTETGDLLPPCVEAALNLGCKPVRTSRSDRHNNPRTYLAPRTQQPPPSGPPKSVGGNPINYTTKFTSSTVSGIHVSDSNQYAHQNSRMMGSCNYPFSDSFPSGQQHHQPLRVETKSSMNMGSVYPLYYSHEAKEPQLRTANVDNTCSDTIFVGRPVMTPVPEPSGIGRMDNFSYGRFQHVPNRIAKEPVFGTHQEPPDRECDLSLRLGQSLHPGMNRKGSSAYEMEDAGLRGSQDGRKLTHLSMQKNKELCFYPRETGYGTVDSANYTKYNGEGEDQNLETAMRKRKAPVGNNEEDGQFCQYLGVPSNQFSVEPKGQVRR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1373 417 MobiDBLite consensus disorder prediction 120 155 - -
Lal19g1373 417 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 1 411 - -
Lal19g1373 417 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 1 411 - -
Lal19g1373 417 Gene3D Coactivator CBP, KIX domain 11 89 IPR036529 GO:0003712|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1373 Lal-Chr19 16574583 16576854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1373 - - ahf:112723293 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1818 14 17913344 17916141 Lal19g1373 19 16574583 16576854 LSH
Lal7g1251 7 18040134 18042226 Lal19g1373 19 16574583 16576854 LSH
Lal19g1373 19 16574583 16576854 Lal17g1404 17 15557489 15563393 PCT
Lal19g1373 19 16574583 16576854 Lal4g1417 4 18377322 18383702 PCT