Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1320 ATGGGTGACAAAGGTAGCAATAACAGTGATGAGGGTCAAATTCAGTCAAAATTGGTCCATGGAAAATATGAGCTAGGTCGTCTTCTAGGTCACGGTACCTTCGCTAAGGTGTACCATGCAAGGAACATTGAAACTGGAAAAAACGTTGCCATGAAGGTTATAGGGAAAGAAAAAGTCATCAAAGTTGGAATGATGGAACAGATGAAGAGAGAGATCTCGGTTATGAAGATGGTGAAGCACCCAAACATTGTTCAACTACATGAAGTCATGGCCAGTAAATCCAAGATCTACATCGCCATGGAGCTCGTTCGAGGCGAGGAGCTCTTCAACAAGGTCGTTAAAGGACGGTTAGGAGAAGATGTAGCCAGGTTTTACTTTCAGCAATTGATCTCAGCCATCGATTTCTGCCACAGCCGCGGCGTTTACCACCGCGACCTGAAGCCGGAGAATCTCCTCCTCGACGAAGATGGGAACCTTAAGGTCTCTGATTTTGGTCTCAGTGCTTTCTCGGAGGAGCATTTGAGGCAAGATGGGTTGTTGCACACCACATGCGGCACTCCGGCGTATGTGTCGCCGGAGGTTATTGCGAAGAAAGGGTACGACGGTGCCAAAGCAGATCTATGGTCTTGTGGGGTCATATTATATGTTCTTCTCGCAGGATTCTTACCCTTTCAAGATGAAAATCTGATTGTTATGTATAAAAAGATTTACAAGGGTGATTTCAAGTCCCCACCTTGGTTCTCTTTAGAAGCAAGAAGATTCATCACTAAGCTTCTGGACCCGAACCCGAATACCCGTATTACAATATCCAAGATAATGGACTCATCTTGGTTTAAAAAACCAGTGCCTCAGAGTTTGATGAGGAGGAAGGAGGAGAATGAGTTGTTTGATTTGGAGGAGAAGGAGAAGTGTGAGATGTCTAAGACTATGAATGCTTTTCATATAATCTCTTTATCTGAAGGGTTTGATTTGTCGCCGTTATTTGAGGAGAAGAAGAGGGCTGAGAGGGAGGAGATGAGGTTTGCCACGGCGGGGACACCAAGCAGCGTGATATCGAGGTTGGAGGAGGTGGCGAAGGCGGTGAAGTTCGATGTGAAGAGTAGTGACACAAAGGTGAGGCTACAAGGGCAAGAGCGTGGAAGGAAGGGAAAGTTGGCAATTGCGGCGGATATATACGCCGTAACGCCGTCGTTTTTGGTGGTGGAGGTTAAGAAGGATAATGGTGATACTTTGGAGTATAATCAGTTCTGCAGTAACAAGCTTCGTCCTGCACTCAGAGACATTTTATGGACTTCTCCTCCTGAGAATTAA 1311 0.4577 MGDKGSNNSDEGQIQSKLVHGKYELGRLLGHGTFAKVYHARNIETGKNVAMKVIGKEKVIKVGMMEQMKREISVMKMVKHPNIVQLHEVMASKSKIYIAMELVRGEELFNKVVKGRLGEDVARFYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVSDFGLSAFSEEHLRQDGLLHTTCGTPAYVSPEVIAKKGYDGAKADLWSCGVILYVLLAGFLPFQDENLIVMYKKIYKGDFKSPPWFSLEARRFITKLLDPNPNTRITISKIMDSSWFKKPVPQSLMRRKEENELFDLEEKEKCEMSKTMNAFHIISLSEGFDLSPLFEEKKRAEREEMRFATAGTPSSVISRLEEVAKAVKFDVKSSDTKVRLQGQERGRKGKLAIAADIYAVTPSFLVVEVKKDNGDTLEYNQFCSNKLRPALRDILWTSPPEN 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1320 436 Gene3D Transferase(Phosphotransferase) domain 1 100 282 - -
Lal19g1320 436 ProSiteProfiles Protein kinase domain profile. 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1320 436 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 436 - -
Lal19g1320 436 PANTHER - 16 436 - -
Lal19g1320 436 CDD STKc_SnRK3 22 277 - -
Lal19g1320 436 Pfam Protein kinase domain 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1320 436 Gene3D Kinase associated domain 1, KA1 305 431 - -
Lal19g1320 436 SMART serkin_6 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1320 436 Pfam NAF domain 308 366 IPR004041 GO:0007165
Lal19g1320 436 ProSitePatterns Protein kinases ATP-binding region signature. 29 56 IPR017441 GO:0005524
Lal19g1320 436 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Lal19g1320 436 Gene3D Phosphorylase Kinase; domain 1 14 99 - -
Lal19g1320 436 SUPERFAMILY Protein kinase-like (PK-like) 19 292 IPR011009 -
Lal19g1320 436 CDD CIPK_C 311 426 - -
Lal19g1320 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1320 Lal-Chr19 16186739 16188049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1320 1 434 CBL-interacting serine-threonine protein kinases AT4G30960 72.009 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lal19g1320 Pkinase 4.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1320 - K07198 var:108321114 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1770 14 17570427 17571740 Lal19g1320 19 16186739 16188049 LSH