Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1311 ATGGCTTCCTCCTTGCCAATTGTGTCTCCAATACTCTTCATCATGTTCTCATTGCTGCTCTTAATTTCCTTATGTGAAGGCTTTGATTTTGTAGTTGGAGGGAGTAAAGATCAGTGGAAGGTTCCACTTCAGTCACCAGATTCGCTCAACCGTTGGGCCGAGGCCCAACGATTCAGGATCGGCGATACTCTAGTATTCAAATATGATAACAGCACAGAATCAGTGCACTTAGTGAATGAAGAGGACTATTTAGCATGCAATACGTTAAGGAATCACACAATATTGAAGGATGGGAATTCCAAGTTCAACCTTATGGATTCAGGGCCATTTCACTTCATAAGTGGATCACAGGGTCATTGCCAAATGGGGTTAAAGCTAGTTGTAGTGGTTATGTCTCATAGACCTGCTGCTAATGGAACTGTTCATTCTCCTCCTATCTCTCTTGCTCTACCTTCACCTGCACTCTCACCAAGTATTAATCAAGCTGTTCTACACACTTCAGGCACTGCATTCACCTCAGTTATCATGGGGTTGGGGAGTTTCATTGGTCATATGATCATATTTGAATTAATGTAA 576 0.4219 MASSLPIVSPILFIMFSLLLLISLCEGFDFVVGGSKDQWKVPLQSPDSLNRWAEAQRFRIGDTLVFKYDNSTESVHLVNEEDYLACNTLRNHTILKDGNSKFNLMDSGPFHFISGSQGHCQMGLKLVVVVMSHRPAANGTVHSPPISLALPSPALSPSINQAVLHTSGTAFTSVIMGLGSFIGHMIIFELM 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1311 191 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
Lal19g1311 191 CDD OsENODL1_like 28 131 IPR041846 -
Lal19g1311 191 Gene3D - 28 142 IPR008972 -
Lal19g1311 191 PANTHER EARLY NODULIN-LIKE PROTEIN 3 14 150 - -
Lal19g1311 191 PANTHER BLUE COPPER PROTEIN 14 150 IPR039391 GO:0009055
Lal19g1311 191 Pfam Plastocyanin-like domain 39 123 IPR003245 GO:0009055
Lal19g1311 191 SUPERFAMILY Cupredoxins 27 131 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1311 Lal-Chr19 16136556 16143059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1311 1 182 Phytocyanin Superfamily AT4G31840 35.714 9.38e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1311 - - gmx:100784860 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1311 19 16136556 16143059 Lal19g1311 19 16136556 16143059 ECH
Lal14g1764 14 17537244 17538217 Lal19g1311 19 16136556 16143059 LSH