Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1308 ATGCAGCAAGGTGATCAAACATTTATTAGCTTGAGGCCTGGCGGTGGTCGCGGCGGTGGCAGCGGCGGTAACAGATTCGCTGCTCCTCGATTCGATTCCTCCTCTTCTGCTGCTTCAATCCCTGTTTTCGGTTCCTTTTCTTCTGATCCATCTCTTTCTTCTCTACATGCCGCTTCTTCATTCTCTATTCAGTCAGGAGATTCACGGTTTGAGGGTCGTGAGCGTGTGCGATATACCGGAGACCAGCTTTTAAAGCTTCGAGAGGTTGTTGAGATCCCCGATGATATTTTAAAGATCAAACAAGATATTGCAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGGCCGTCCAGAGAACAATCCTCCAAATCAATCACAAAATCGATATACTGAGGCAGATAACCGTGACTGGCGTGGCCGTTCTGGGCAGCTTCCTGCTAATGCAGATGAGAGGTCTTGGGGTAATCTCAAGGAGAATAGAGACTTTGGCAATAATAATTGGAAAGACCAACTGAATTCTCAGTTTGGAAGGGCACAAATCTCTTCTAACCAAGGGGGAGGACCTACTCCTAGTCTAGTCAAGGCTGAGGTGCCCTGGTCAGCTAGAAAGGCAACTCTCTCTGACAAGGACCGTGTCTTGAAGACTGTTAAAGGAATACTAAATAAGTTAACTCCTGAGAAATTTGATCTCTTGAAGGGTCAGTTGATCGATTCTGGCATTACATCAGCCGACATATTGAAGGGAGTCATTTCTCTAATTTTTGATAAGGCAGTGCTAGAGCCAACCTTTTGCCCCATGTATTCTCTGTTGTGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCATCCGATGAACCTGGTGGGAAAGAAATCACTTTTAAAAGAGTGCTCTTGAATATCTGTCAGGAGGCCTTTGAAGGTGCAGATAAACTGAGGGAAGAACTGAGGCAGATGACTGCCCCTGAGCAGGAGATGGAGCGGCGAGACAAGGAAAAACTTGTCAAGATTCGTACCCTTGGAAACATCCGTTTAATTGGTGAGCTGTTGAAGCAAAAAATGGTTCCTGAAAGGATTGTCCATCACATTGTTCAGGAGCTTTTAGGACCTCCTGATAGCAAGGTTTGTCCAGCTGAGGAAAATGTTGAAGCTATATGTCAGTTTTTCAACACCATTGGTAAGCAGCTTGATGAAAGTCCAAAATCACGGCGTATAAATGATATGTACTTCAGTGGGTTGAAAGAATTGAGCACAAATCCCGAACTTGCACCACGGCTGAGGTTCATGGTTCGTGATGTTATAGACTTGCGTGCTAATAACTGGATTCCAAGACGTGAAGAGGTAAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAAAAAAATCTTGGATTGCGTCCAGGTGCCACTGCAAGTATGAGAAATATCCGTGTAGCTTCTGTTGCTCAAGGGAGTACCAACCCTGGGGGCTTCCCCATTGCTCGCCCTGGTACAGGGGGTTTGATGCCGGGGATGCCAGGGATGCCAGGGAGGGTGACACCTGGAGTGCCTGGACTTGATAATGACAACTGGGAGAAGCCTAGGTCTAGATCAATAACAAGAGGAGACATTTCTGGCACACTAAGTGCTGGACGTGGCCAGTCTCCTTTTCTTTCCAAGTCATCATCAACCGTGAACTCCAAGTTTCTACCCCAAGGCAGTGGTCTTGTTAGTGGGAGAAATAGTGCCTTAGTACATGGCGCAGGTGGAACCCCTTCTGCCCGTCTATCAAACACTGGTGTAGCTACTGAGTCTGCACCTGAAATCCCTTCGCCTGTCAAACCTGTTGCTGCTGTGTCCGCTGTGGTGTCACAGGCTCCTGCTGCCAAATTGAACACCGATGTTCTTCGCCGGAAAACTGTTTCTCTTCTGGAAGAATATTTCAGTGTTCGACTTTTGGATGAGGCATTACAGTGTGTGGAGGAACTAAAATCTCCAGCTTACTATCCCGAGCTTGTGAAGGAAGCCATTTCCCTTGCACTGGATAAAAGTCCGCCTTGCATTGAACCAGTGGCCAATCTTGTTGAGTATCTGTTTATTAAGAAGATTCTTTCAGGAAGAGACATAGGGACTGGTTGCTTGTTGTTTGGTTCTATGATGGATGATATTGGCATAGATTTACCTAAGGCACCAAATAATTTTGGTGAAATAATAGGGAAACTAATTTTGACCGGGGGATTGAATTTTAAGGTGGTAAGAGAGATACTTAAGAAGGTGGAGGATGACCGGTTCCAGAAAGCGATATTTGATGCTGCAGTTCAGGTAATTAGCACTGCATCTGGGCAAGTCGTGTTGGATTCACAAGCATTTGATATTGAAGCTTGCCGGAGTGTGTTCATCTGA 2382 0.4572 MQQGDQTFISLRPGGGRGGGSGGNRFAAPRFDSSSSAASIPVFGSFSSDPSLSSLHAASSFSIQSGDSRFEGRERVRYTGDQLLKLREVVEIPDDILKIKQDIAAELFGEDQSWGRPENNPPNQSQNRYTEADNRDWRGRSGQLPANADERSWGNLKENRDFGNNNWKDQLNSQFGRAQISSNQGGGPTPSLVKAEVPWSARKATLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYSLLCSDLNEKLPPFPSDEPGGKEITFKRVLLNICQEAFEGADKLREELRQMTAPEQEMERRDKEKLVKIRTLGNIRLIGELLKQKMVPERIVHHIVQELLGPPDSKVCPAEENVEAICQFFNTIGKQLDESPKSRRINDMYFSGLKELSTNPELAPRLRFMVRDVIDLRANNWIPRREEVKAKTITEIHSEAEKNLGLRPGATASMRNIRVASVAQGSTNPGGFPIARPGTGGLMPGMPGMPGRVTPGVPGLDNDNWEKPRSRSITRGDISGTLSAGRGQSPFLSKSSSTVNSKFLPQGSGLVSGRNSALVHGAGGTPSARLSNTGVATESAPEIPSPVKPVAAVSAVVSQAPAAKLNTDVLRRKTVSLLEEYFSVRLLDEALQCVEELKSPAYYPELVKEAISLALDKSPPCIEPVANLVEYLFIKKILSGRDIGTGCLLFGSMMDDIGIDLPKAPNNFGEIIGKLILTGGLNFKVVREILKKVEDDRFQKAIFDAAVQVISTASGQVVLDSQAFDIEACRSVFI 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1308 793 MobiDBLite consensus disorder prediction 517 557 - -
Lal19g1308 793 MobiDBLite consensus disorder prediction 116 130 - -
Lal19g1308 793 Pfam MIF4G domain 213 439 IPR003890 GO:0003723|GO:0005515
Lal19g1308 793 SUPERFAMILY ARM repeat 624 771 IPR016024 -
Lal19g1308 793 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 792 - -
Lal19g1308 793 MobiDBLite consensus disorder prediction 533 557 - -
Lal19g1308 793 ProSiteProfiles MI domain profile. 628 750 IPR003891 -
Lal19g1308 793 MobiDBLite consensus disorder prediction 110 168 - -
Lal19g1308 793 MobiDBLite consensus disorder prediction 1 31 - -
Lal19g1308 793 SMART if4_15 213 439 IPR003890 GO:0003723|GO:0005515
Lal19g1308 793 SUPERFAMILY ARM repeat 206 441 IPR016024 -
Lal19g1308 793 Gene3D - 204 440 - -
Lal19g1308 793 SMART ma3_7 629 741 IPR003891 -
Lal19g1308 793 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 792 IPR045208 GO:0003743
Lal19g1308 793 Pfam MA3 domain 629 740 IPR003891 -
Lal19g1308 793 Gene3D - 622 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1308 Lal-Chr19 16116232 16122336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1308 1 791 Eukaryotic Initiation Factors Gene Family AT5G57870 62.594 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1308 K03260 - gmx:100781275 1206.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1308 19 16116232 16122336 Lal19g1308 19 16116232 16122336 ECH