LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal19g1305	ATGGTAATGGCCCAACAATGGTTTTGTTGCTATCTTCACTATCTTGTTATAGCCATTTCCATTACTCCTTTTGTTGTTGTCACTGCAAAACCACATTCCTCTGAGCAAGTCCATGACAAGGTTGGTAAACTTCCTGGTCAACACTTCACCATTGACTTTGATCACTATTCTGGTTATGTCACTGTCAATGAGAAAGCTGGGAGGGCATTGTTTTATTGGTTTATTCAGTCTGGTCAACACCATGAAACCAAACCACTTCTTTTATGGTTCAATGGAGGGCCTGGATGTTCATCCATTGCTTATGGTGAGGCAGAGGAAATTGGCCCCTTTCATATAAGGCCAGATGGAAAGACCCTTTATCTCAATCCTTACTCTTGGAACAAAGTTGCCAACATTCTCTTTGTGGATTCTCCTGCTGGAGTTGGATTTTCATATTCAAACACTTCATCTGACATTGACAACAATGGTGACAAGAAGACTGCTGAGGACAATTTAGTATTCCTATTGAGGTGGTTTGAGCGCTTTCCCCAATATAAAGGAAGGGATGTCTTTATTTCTGGAGAGAGCTATGCAGGGCATTATGTTCCTCAACTTAGCCAAGCTATTGTGAAGCACAACTTAAGAAATAAGGAAAACGCGATAAATCTGAAAGGTTACCTGGTTGGAAATGCTCTTACTGATGATTTCCATGACCATTTGGGGGTTGCTCAGTTTATGTGGTCAAGTGGTTTGATTTCTGATGGAACATACAAACTCTTGAATCGTCGTTGTGGCAATCAGTCATTTGTACACACCTCAGCTAAATGTCTGGATATTCAAGCAATTGCTTATAAAGAACTTGGCAACATTGATCCATACAGTATCTTTACTCCTCCATGTCCTGATAATCCTAGCCAGTCATATCAGCTGCTGAGAGGAAAACATACCAATAGAAGTGGTAAAGTCGGTGAAAAGTATGATCCTTGCACCGAGAGACACTCTACCAAGTACTTCAATTTACCTAAGGTCCAAAAGGCACTTCATGTTGATCCAGATCTTAAGCCTACTAGTAAATGGCAGACCTGCAGAGACCAGAAGGCTCTTATTTATTCTCTCATGCTTTGCAGTTCTTTTACCTGGAAGGATTCTGCAAGTACAGTGCTTGATATTTATCGCGAGCTTATTCCTTTGGGACTGAGGATATGGATGTTCAGTGGTGACACAGATGCCATAATCCCAGTGACATCTACTCGCTATAGTATAGCTGCTCTTAAGCTTCAGACACTGATCCCTTGGCGTCCATGGTATCATCATGATCAGGTGGGAGGATGGATACAAGAATATGCAGGACTTACTTTTGTGGCAGTAAGGGGAGCAGGGCATGAAGTTCCCCTGCATAAACCTAAACTTGCTCTTGCACTCGTTAAAGCCTTCTTAGATGGAACCACCTTACCCGCCCTAGCCGTAGTCTCTACAAATAGATAA	1464	0.4201	MVMAQQWFCCYLHYLVIAISITPFVVVTAKPHSSEQVHDKVGKLPGQHFTIDFDHYSGYVTVNEKAGRALFYWFIQSGQHHETKPLLLWFNGGPGCSSIAYGEAEEIGPFHIRPDGKTLYLNPYSWNKVANILFVDSPAGVGFSYSNTSSDIDNNGDKKTAEDNLVFLLRWFERFPQYKGRDVFISGESYAGHYVPQLSQAIVKHNLRNKENAINLKGYLVGNALTDDFHDHLGVAQFMWSSGLISDGTYKLLNRRCGNQSFVHTSAKCLDIQAIAYKELGNIDPYSIFTPPCPDNPSQSYQLLRGKHTNRSGKVGEKYDPCTERHSTKYFNLPKVQKALHVDPDLKPTSKWQTCRDQKALIYSLMLCSSFTWKDSASTVLDIYRELIPLGLRIWMFSGDTDAIIPVTSTRYSIAALKLQTLIPWRPWYHHDQVGGWIQEYAGLTFVAVRGAGHEVPLHKPKLALALVKAFLDGTTLPALAVVSTNR	487

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal19g1305	487	Gene3D	-	380	474	-	-
	Lal19g1305	487	SUPERFAMILY	alpha/beta-Hydrolases	39	477	IPR029058	-
	Lal19g1305	487	Pfam	Serine carboxypeptidase	45	474	IPR001563	GO:0004185\|GO:0006508
	Lal19g1305	487	Gene3D	-	322	358	-	-
	Lal19g1305	487	Gene3D	alpha/beta hydrolase	36	294	IPR029058	-
	Lal19g1305	487	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	15	481	IPR001563	GO:0004185\|GO:0006508
	Lal19g1305	487	ProSitePatterns	Serine carboxypeptidases, serine active site.	185	192	IPR018202	GO:0004185
	Lal19g1305	487	PRINTS	Carboxypeptidase C serine protease (S10) family signature	122	134	IPR001563	GO:0004185\|GO:0006508
	Lal19g1305	487	PRINTS	Carboxypeptidase C serine protease (S10) family signature	135	145	IPR001563	GO:0004185\|GO:0006508
	Lal19g1305	487	PRINTS	Carboxypeptidase C serine protease (S10) family signature	171	196	IPR001563	GO:0004185\|GO:0006508
	Lal19g1305	487	PRINTS	Carboxypeptidase C serine protease (S10) family signature	444	457	IPR001563	GO:0004185\|GO:0006508
	Lal19g1305	487	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 29	15	481	-	-
	Lal19g1305	487	ProSitePatterns	Serine carboxypeptidases, histidine active site.	444	461	IPR033124	GO:0004185

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal19g1305	Lal-Chr19	16104127	16107072	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal19g1305	332	477	Calmodulin-binding Proteins	AT2G22960	26.531	1.91e-08	52.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal19g1305	K16297		-	mnt:21391855	654.825