Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1295 ATGGGTGGTCTAGGTGGCCAACTTCCAGTAATAGGCATGATCGGGTTACAGATTCATTATGCAGCGCTTGCCATTTTTGTAAGAGCTGCTTTGTTAAATGGGTTGAGTCCCACTGTTTTTGTAGTGTACAGACAAGGCATAGCCACCTTAGCATTGGTGCCTATGGCTTTTTCCCCTAACCGGAGACAATCTTTGAACACTTCAATGGGATTAAGGAGCTTCTTGTTGATATTTGCTACCTCTCTTATTGGAGTAACAGCAAATCAGAATGCATATTTTACAGGTTTATATTATGCATCTTCCACAGCAGCTACTGCACTGAATAATCTGATACCCGCATTAACTTTTTTTATGGCAGCAATTGTTGGATTTGAGAAAATTGGTCTAAGAAGCTTAAGAAGCATTGCCATGATATTAGGAACAGTTTGTTGTGTCAGTGGAGCCTTAACCATGGCATTGCTGAAAGGACAAAAACTGCTACATATGGAGTTTATTCCCTCTATAAATCTCAGAGCCAGTGAAAGTGATAATTGGCAGCTAGGTTGTTTATTGCTCTTAATAAGTACTGTATTTTGGTCATGTTGGATGATCATGCAGGTACCAATTTCTTCAAGCTGCCCAGATCATATATTATCCACCTTCTGGACGTGTTTCTTTGCAACTATACAGTCAGCCATATTTGCACTGCTCTACGAGCAAAATCTTCAAGCATGGATTGTAAATTCACCACTACAATTTTCATGTTGCTTATATGCAGGAATTGGGATTGCGGTTAGCTTCTTTATTCAAACCTGGTGCATCTCAGAAAGAGGTCCTTTGTATTGTGCAATGTTCAGCCCTCTTGCAACTGTCATAACAGCTTTGATAACTGTTACATTTATGCATGAAGAACTATATGTTGGAAGTTTGATAGGAGCTATTGGAGTGATTGCTGGTTTATATATTGTACTGTGGGGTAAAGCCAAAGAGATTGAAGGGATTAAACAAGAGAAACAATCAACTTTGCAGGATGATAAGATAATTAGTAGTATAGATTTGGAAGAACCACTTCTGTCAGAGAATTCAGAAAATGTAGCAGAGGCCAAGATTGAATCATGA 1098 0.3889 MGGLGGQLPVIGMIGLQIHYAALAIFVRAALLNGLSPTVFVVYRQGIATLALVPMAFSPNRRQSLNTSMGLRSFLLIFATSLIGVTANQNAYFTGLYYASSTAATALNNLIPALTFFMAAIVGFEKIGLRSLRSIAMILGTVCCVSGALTMALLKGQKLLHMEFIPSINLRASESDNWQLGCLLLLISTVFWSCWMIMQVPISSSCPDHILSTFWTCFFATIQSAIFALLYEQNLQAWIVNSPLQFSCCLYAGIGIAVSFFIQTWCISERGPLYCAMFSPLATVITALITVTFMHEELYVGSLIGAIGVIAGLYIVLWGKAKEIEGIKQEKQSTLQDDKIISSIDLEEPLLSENSENVAEAKIES 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1295 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 145 - -
Lal19g1295 365 PANTHER WAT1-RELATED PROTEIN 9 348 - -
Lal19g1295 365 Pfam EamA-like transporter family 180 317 IPR000620 GO:0016020|GO:0016021
Lal19g1295 365 Pfam EamA-like transporter family 10 145 IPR000620 GO:0016020|GO:0016021
Lal19g1295 365 PANTHER WAT1-RELATED PROTEIN 9 348 IPR030184 GO:0016021|GO:0022857
Lal19g1295 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 215 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1295 Lal-Chr19 16042568 16049378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1295 1 355 Nodulin-like Gene Family AT4G30420 43.280 5.72e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1295 - - gmx:100816384 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1295 19 16042568 16049378 Lal19g1295 19 16042568 16049378 ECH