Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1290 ATGTCTGTGCTGACCATGATGTTACGAATGGGGAATTCTAGGTCGGTCAAGCAAGAATTCCTCCGGAAATGGATAAAAGGTTTCAGAAAATATAGCTCACAAAAGAAGAACATGAACATGGTGGAGAGAAAGAAGGCCATAAAGCTGTCAGCAGATATAGCCATGGCTTCAACCAGAAACAAAACCAAGCGCTGGAGCCAGGTCCTTATTGCTAATGCTTCAAGAGACGGCAACAACAAGCTCCTCACAGAAAACATATTAGACTCATCTCCACAGAACTCTGAAAAGATGGTAAGGAAAAACTTGATTAATTTGTCACCACTTTGCAGTAAAAGAGTTAGAAGCAGAAAAGTCTTGAGAAGAAACCGTACAATGATCCATAAATCATCAAAGGAAAATTTAATGGCTAGTTCTATTGCTAAGAGGCTGACGATTCAAAAGAGAACACGAAGGCTCAAGAGTTTGTTACCAGGTGGAGAATTTATGGATGGTGTGTCTTTGGTAGAAGAAACCCTAGATTATATAGAATCTCTGCGAGCTCAAGTTGAAGTCATGAGATGCCTTGTCACTGCCTCAGAGTTATTCATCAATCCATCATAA 600 0.4017 MSVLTMMLRMGNSRSVKQEFLRKWIKGFRKYSSQKKNMNMVERKKAIKLSADIAMASTRNKTKRWSQVLIANASRDGNNKLLTENILDSSPQNSEKMVRKNLINLSPLCSKRVRSRKVLRRNRTMIHKSSKENLMASSIAKRLTIQKRTRRLKSLLPGGEFMDGVSLVEETLDYIESLRAQVEVMRCLVTASELFINPS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1290 199 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 14 191 - -
Lal19g1290 199 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 14 191 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1290 Lal-Chr19 15998709 15999752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1290 10 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 38.919 6.17e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1290 - - lang:109346753 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1290 19 15998709 15999752 Lal19g1290 19 15998709 15999752 ECH
Lal14g1747 14 17442689 17443177 Lal19g1290 19 15998709 15999752 LSH
Lal7g1151 7 17376591 17377807 Lal19g1290 19 15998709 15999752 LSH